Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 RVB2YPL235W 1416 nt10.18□□□□□ -0.78
RKR1Q04781 YPL257WYPL257W 582 nt10.18□□□□□ -0.78
RKR1Q04781 ALD5YER073W 1563 nt10.17□□□□□ -0.78
RKR1Q04781 FLC2YAL053W 2352 nt10.17□□□□□ -0.78
RKR1Q04781 LYS1YIR034C 1122 nt10.17□□□□□ -0.78
RKR1Q04781 ARE2YNR019W 1929 nt10.16□□□□□ -0.78
RKR1Q04781 YDL177CYDL177C 513 nt10.16□□□□□ -0.78
RKR1Q04781 OGG1YML060W 1131 nt10.16□□□□□ -0.78
RKR1Q04781 GLC8YMR311C 690 nt10.16□□□□□ -0.78
RKR1Q04781 KSH1YNL024C-A 219 nt10.16□□□□□ -0.78
RKR1Q04781 CTF19YPL018W 1110 nt10.16□□□□□ -0.78
RKR1Q04781 FAL1YDR021W 1200 nt10.15□□□□□ -0.78
RKR1Q04781 DFM1YDR411C 1026 nt10.14□□□□□ -0.79
RKR1Q04781 SRL2YLR082C 1179 nt10.14□□□□□ -0.79
RKR1Q04781 STT3YGL022W 2157 nt10.14□□□□□ -0.79
RKR1Q04781 YDR015CYDR015C 240 nt10.14□□□□□ -0.79
RKR1Q04781 TSR3YOR006C 942 nt10.14□□□□□ -0.79
RKR1Q04781 YRF1-2YER190W 5046 nt10.13□□□□□ -0.79
RKR1Q04781 PAC2YER007W 1557 nt10.13□□□□□ -0.79
RKR1Q04781 GCV3YAL044C 513 nt10.12□□□□□ -0.79
RKR1Q04781 CAN1YEL063C 1773 nt10.11□□□□□ -0.79
RKR1Q04781 MRPL28YDR462W 444 nt10.11□□□□□ -0.79
RKR1Q04781 tG(GCC)BtG(GCC)B 71 nt10.11□□□□□ -0.79
RKR1Q04781 SUF16tG(GCC)C 71 nt10.11□□□□□ -0.79
RKR1Q04781 tG(GCC)D1tG(GCC)D1 71 nt10.11□□□□□ -0.79
RKR1Q04781 tG(GCC)D2tG(GCC)D2 71 nt10.11□□□□□ -0.79
RKR1Q04781 tG(GCC)EtG(GCC)E 71 nt10.11□□□□□ -0.79
RKR1Q04781 SUF20tG(GCC)F1 71 nt10.11□□□□□ -0.79
RKR1Q04781 tG(GCC)F2tG(GCC)F2 71 nt10.11□□□□□ -0.79
RKR1Q04781 tG(GCC)G1tG(GCC)G1 71 nt10.11□□□□□ -0.79
RKR1Q04781 tG(GCC)G2tG(GCC)G2 71 nt10.11□□□□□ -0.79
RKR1Q04781 tG(GCC)J1tG(GCC)J1 71 nt10.11□□□□□ -0.79
RKR1Q04781 SUF23tG(GCC)J2 71 nt10.11□□□□□ -0.79
RKR1Q04781 tG(GCC)MtG(GCC)M 71 nt10.11□□□□□ -0.79
RKR1Q04781 tG(GCC)O1tG(GCC)O1 71 nt10.11□□□□□ -0.79
RKR1Q04781 SUF17tG(GCC)O2 71 nt10.11□□□□□ -0.79
RKR1Q04781 tG(GCC)P1tG(GCC)P1 71 nt10.11□□□□□ -0.79
RKR1Q04781 tG(GCC)P2tG(GCC)P2 71 nt10.11□□□□□ -0.79
RKR1Q04781 BUD32YGR262C 786 nt10.11□□□□□ -0.79
RKR1Q04781 ATG36YJL185C 882 nt10.11□□□□□ -0.79
RKR1Q04781 RMD8YFR048W 1989 nt10.11□□□□□ -0.79
RKR1Q04781 HST3YOR025W 1344 nt10.1□□□□□ -0.79
RKR1Q04781 YPL264CYPL264C 1062 nt10.09□□□□□ -0.79
RKR1Q04781 HXK1YFR053C 1458 nt10.08□□□□□ -0.8
RKR1Q04781 GAT4YIR013C 366 nt10.08□□□□□ -0.8
RKR1Q04781 YJR146WYJR146W 354 nt10.08□□□□□ -0.8
RKR1Q04781 YNL285WYNL285W 372 nt10.08□□□□□ -0.8
RKR1Q04781 ENB1YOL158C 1821 nt10.08□□□□□ -0.8
RKR1Q04781 MNS1YJR131W 1650 nt10.07□□□□□ -0.8
RKR1Q04781 COX10YPL172C 1389 nt10.07□□□□□ -0.8
RKR1Q04781 POX1YGL205W 2247 nt10.07□□□□□ -0.8
RKR1Q04781 YKR018CYKR018C 2178 nt10.07□□□□□ -0.8
RKR1Q04781 SNT309YPR101W 528 nt10.06□□□□□ -0.8
RKR1Q04781 HXT9YJL219W 1704 nt10.06□□□□□ -0.8
RKR1Q04781 UTP4YDR324C 2331 nt10.06□□□□□ -0.8
RKR1Q04781 ECM14YHR132C 1293 nt10.05□□□□□ -0.8
RKR1Q04781 RUF23RUF23 254 nt10.05□□□□□ -0.8
RKR1Q04781 YFL013W-AYFL013W-A 804 nt10.05□□□□□ -0.8
RKR1Q04781 MDE1YJR024C 735 nt10.05□□□□□ -0.8
RKR1Q04781 MHP1YJL042W 4197 nt10.04□□□□□ -0.8
RKR1Q04781 CDC19YAL038W 1503 nt10.04□□□□□ -0.8
RKR1Q04781 MAK31YCR020C-A 267 nt10.03□□□□□ -0.8
RKR1Q04781 GTO3YMR251W 1101 nt10.03□□□□□ -0.8
RKR1Q04781 YET3YDL072C 612 nt10.02□□□□□ -0.81
RKR1Q04781 AAT2YLR027C 1257 nt10.02□□□□□ -0.81
RKR1Q04781 RFC4YOL094C 972 nt10.02□□□□□ -0.81
RKR1Q04781 PPT1YGR123C 1542 nt10.02□□□□□ -0.81
RKR1Q04781 YBR241CYBR241C 1467 nt10.01□□□□□ -0.81
RKR1Q04781 YJR084WYJR084W 1272 nt10□□□□□ -0.81
RKR1Q04781 KTR3YBR205W 1215 nt9.99□□□□□ -0.81
RKR1Q04781 EDE1YBL047C 4146 nt9.98□□□□□ -0.81
RKR1Q04781 CCC2YDR270W 3015 nt9.98□□□□□ -0.81
RKR1Q04781 AMD2YDR242W 1650 nt9.98□□□□□ -0.81
RKR1Q04781 RHB1YCR027C 630 nt9.97□□□□□ -0.81
RKR1Q04781 IRC11YOR013W 471 nt9.97□□□□□ -0.81
RKR1Q04781 RPS5YJR123W 678 nt9.97□□□□□ -0.81
RKR1Q04781 DFR1YOR236W 636 nt9.97□□□□□ -0.81
RKR1Q04781 YJR154WYJR154W 1041 nt9.96□□□□□ -0.82
RKR1Q04781 OPI11YPR044C 354 nt9.96□□□□□ -0.82
RKR1Q04781 SNF4YGL115W 969 nt9.95□□□□□ -0.82
RKR1Q04781 LOT6YLR011W 576 nt9.95□□□□□ -0.82
RKR1Q04781 CRF1YDR223W 1404 nt9.94□□□□□ -0.82
RKR1Q04781 YLR112WYLR112W 420 nt9.94□□□□□ -0.82
RKR1Q04781 SKS1YPL026C 1509 nt9.94□□□□□ -0.82
RKR1Q04781 RDN5-2RDN5-2 119 nt9.93□□□□□ -0.82
RKR1Q04781 RDN5-3RDN5-3 119 nt9.93□□□□□ -0.82
RKR1Q04781 RDN5-4RDN5-4 119 nt9.93□□□□□ -0.82
RKR1Q04781 RDN5-5RDN5-5 119 nt9.93□□□□□ -0.82
RKR1Q04781 CAF40YNL288W 1122 nt9.93□□□□□ -0.82
RKR1Q04781 TOK1YJL093C 2076 nt9.93□□□□□ -0.82
RKR1Q04781 RPP1YHR062C 882 nt9.91□□□□□ -0.82
RKR1Q04781 RFS1YBR052C 633 nt9.91□□□□□ -0.82
RKR1Q04781 YCR041WYCR041W 333 nt9.9□□□□□ -0.82
RKR1Q04781 MTR3YGR158C 753 nt9.9□□□□□ -0.82
RKR1Q04781 RPE1YJL121C 717 nt9.9□□□□□ -0.82
RKR1Q04781 YPL250W-AYPL250W-A 288 nt9.9□□□□□ -0.82
RKR1Q04781 PNP1YLR209C 936 nt9.89□□□□□ -0.83
RKR1Q04781 LDB16YCL005W 771 nt9.89□□□□□ -0.83
RKR1Q04781 PRS2YER099C 957 nt9.88□□□□□ -0.83
RKR1Q04781 JNM1YMR294W 1122 nt9.88□□□□□ -0.83
Retrieved 100 of 7,029 protein–RNA pairs in 61.8 ms