Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.59■□□□□ 0.73
TgfaP48030 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TgfaP48030 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TgfaP48030 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TgfaP48030 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TgfaP48030 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TgfaP48030 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TgfaP48030 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TgfaP48030 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TgfaP48030 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TgfaP48030 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.56■□□□□ 0.72
TgfaP48030 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TgfaP48030 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TgfaP48030 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.55■□□□□ 0.72
TgfaP48030 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TgfaP48030 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TgfaP48030 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TgfaP48030 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TgfaP48030 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TgfaP48030 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TgfaP48030 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TgfaP48030 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TgfaP48030 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TgfaP48030 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.53■□□□□ 0.72
TgfaP48030 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TgfaP48030 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TgfaP48030 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TgfaP48030 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TgfaP48030 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TgfaP48030 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TgfaP48030 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TgfaP48030 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TgfaP48030 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TgfaP48030 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TgfaP48030 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TgfaP48030 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TgfaP48030 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TgfaP48030 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TgfaP48030 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TgfaP48030 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TgfaP48030 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TgfaP48030 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
TgfaP48030 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TgfaP48030 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TgfaP48030 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TgfaP48030 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TgfaP48030 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TgfaP48030 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TgfaP48030 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.5■□□□□ 0.71
TgfaP48030 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TgfaP48030 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TgfaP48030 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TgfaP48030 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.5■□□□□ 0.71
TgfaP48030 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TgfaP48030 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TgfaP48030 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TgfaP48030 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.49■□□□□ 0.71
TgfaP48030 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.49■□□□□ 0.71
TgfaP48030 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TgfaP48030 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TgfaP48030 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.48■□□□□ 0.71
TgfaP48030 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.48■□□□□ 0.71
TgfaP48030 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TgfaP48030 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TgfaP48030 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TgfaP48030 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TgfaP48030 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.47■□□□□ 0.71
TgfaP48030 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.47■□□□□ 0.71
TgfaP48030 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.47■□□□□ 0.71
TgfaP48030 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TgfaP48030 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.47■□□□□ 0.71
TgfaP48030 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TgfaP48030 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TgfaP48030 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.46■□□□□ 0.71
TgfaP48030 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TgfaP48030 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TgfaP48030 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TgfaP48030 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.45■□□□□ 0.7
TgfaP48030 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TgfaP48030 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TgfaP48030 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.45■□□□□ 0.7
TgfaP48030 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TgfaP48030 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TgfaP48030 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TgfaP48030 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TgfaP48030 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TgfaP48030 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TgfaP48030 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TgfaP48030 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TgfaP48030 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TgfaP48030 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TgfaP48030 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.42■□□□□ 0.7
TgfaP48030 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.42■□□□□ 0.7
TgfaP48030 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TgfaP48030 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TgfaP48030 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TgfaP48030 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.41■□□□□ 0.7
TgfaP48030 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TgfaP48030 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.4■□□□□ 0.7
TgfaP48030 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms