Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Xcl1P47993 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Xcl1P47993 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Xcl1P47993 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Xcl1P47993 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Xcl1P47993 Gm26766-202ENSMUST00000227544 2347 ntBASIC14.68□□□□□ -0.06
Xcl1P47993 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Xcl1P47993 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Xcl1P47993 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Xcl1P47993 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Xcl1P47993 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Xcl1P47993 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Xcl1P47993 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Xcl1P47993 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Xcl1P47993 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Xcl1P47993 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Xcl1P47993 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC14.66□□□□□ -0.06
Xcl1P47993 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Xcl1P47993 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Xcl1P47993 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Xcl1P47993 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Xcl1P47993 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Xcl1P47993 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Xcl1P47993 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Xcl1P47993 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Xcl1P47993 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Xcl1P47993 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Xcl1P47993 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Xcl1P47993 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Xcl1P47993 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Xcl1P47993 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.64□□□□□ -0.07
Xcl1P47993 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Xcl1P47993 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Xcl1P47993 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Xcl1P47993 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Xcl1P47993 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Xcl1P47993 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Xcl1P47993 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Xcl1P47993 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Xcl1P47993 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Xcl1P47993 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.63□□□□□ -0.07
Xcl1P47993 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Xcl1P47993 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Xcl1P47993 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Xcl1P47993 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Xcl1P47993 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Xcl1P47993 Gm42699-201ENSMUST00000198104 1657 ntBASIC14.62□□□□□ -0.07
Xcl1P47993 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Xcl1P47993 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Xcl1P47993 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Xcl1P47993 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Xcl1P47993 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Xcl1P47993 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Xcl1P47993 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Xcl1P47993 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Xcl1P47993 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Xcl1P47993 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Xcl1P47993 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC14.61□□□□□ -0.07
Xcl1P47993 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Xcl1P47993 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC14.61□□□□□ -0.07
Xcl1P47993 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Xcl1P47993 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Xcl1P47993 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC14.6□□□□□ -0.07
Xcl1P47993 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Xcl1P47993 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Xcl1P47993 Gm43006-201ENSMUST00000197702 1602 ntBASIC14.6□□□□□ -0.07
Xcl1P47993 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Xcl1P47993 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
Xcl1P47993 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Xcl1P47993 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Xcl1P47993 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Xcl1P47993 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Xcl1P47993 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Xcl1P47993 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Xcl1P47993 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Xcl1P47993 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Xcl1P47993 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Xcl1P47993 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Xcl1P47993 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Xcl1P47993 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Xcl1P47993 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Xcl1P47993 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC14.57□□□□□ -0.08
Xcl1P47993 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Xcl1P47993 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Xcl1P47993 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Xcl1P47993 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Xcl1P47993 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Xcl1P47993 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Xcl1P47993 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Xcl1P47993 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Xcl1P47993 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Xcl1P47993 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Xcl1P47993 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Xcl1P47993 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Xcl1P47993 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Xcl1P47993 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Xcl1P47993 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Xcl1P47993 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Xcl1P47993 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Xcl1P47993 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms