Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nkx2-6P43688 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.13■□□□□ 0.97
Nkx2-6P43688 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Nkx2-6P43688 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nkx2-6P43688 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Nkx2-6P43688 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Nkx2-6P43688 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.13■□□□□ 0.97
Nkx2-6P43688 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nkx2-6P43688 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nkx2-6P43688 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nkx2-6P43688 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nkx2-6P43688 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nkx2-6P43688 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Nkx2-6P43688 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nkx2-6P43688 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.11■□□□□ 0.97
Nkx2-6P43688 Gm43566-201ENSMUST00000196851 808 ntBASIC21.11■□□□□ 0.97
Nkx2-6P43688 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Nkx2-6P43688 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx2-6P43688 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx2-6P43688 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx2-6P43688 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx2-6P43688 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx2-6P43688 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Nkx2-6P43688 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx2-6P43688 Gm15546-201ENSMUST00000122095 826 ntBASIC21.1■□□□□ 0.97
Nkx2-6P43688 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx2-6P43688 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx2-6P43688 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx2-6P43688 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nkx2-6P43688 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Nkx2-6P43688 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nkx2-6P43688 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx2-6P43688 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx2-6P43688 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Nkx2-6P43688 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nkx2-6P43688 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Nkx2-6P43688 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nkx2-6P43688 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx2-6P43688 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx2-6P43688 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx2-6P43688 Gm45444-201ENSMUST00000211394 898 ntBASIC21.06■□□□□ 0.96
Nkx2-6P43688 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx2-6P43688 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nkx2-6P43688 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nkx2-6P43688 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.05■□□□□ 0.96
Nkx2-6P43688 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Nkx2-6P43688 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nkx2-6P43688 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nkx2-6P43688 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nkx2-6P43688 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.04■□□□□ 0.96
Nkx2-6P43688 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.04■□□□□ 0.96
Nkx2-6P43688 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.04■□□□□ 0.96
Nkx2-6P43688 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Nkx2-6P43688 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nkx2-6P43688 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.04■□□□□ 0.96
Nkx2-6P43688 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.03■□□□□ 0.96
Nkx2-6P43688 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nkx2-6P43688 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.02■□□□□ 0.96
Nkx2-6P43688 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx2-6P43688 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx2-6P43688 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx2-6P43688 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx2-6P43688 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx2-6P43688 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx2-6P43688 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Nkx2-6P43688 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx2-6P43688 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nkx2-6P43688 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nkx2-6P43688 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Nkx2-6P43688 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Nkx2-6P43688 Gm13238-201ENSMUST00000117655 780 ntBASIC20.99■□□□□ 0.95
Nkx2-6P43688 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Nkx2-6P43688 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx2-6P43688 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx2-6P43688 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Nkx2-6P43688 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Nkx2-6P43688 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx2-6P43688 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx2-6P43688 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx2-6P43688 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx2-6P43688 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Nkx2-6P43688 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.98■□□□□ 0.95
Nkx2-6P43688 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx2-6P43688 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Nkx2-6P43688 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.97■□□□□ 0.95
Nkx2-6P43688 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.97■□□□□ 0.95
Nkx2-6P43688 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.97■□□□□ 0.95
Nkx2-6P43688 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.97■□□□□ 0.95
Nkx2-6P43688 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-6P43688 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-6P43688 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-6P43688 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-6P43688 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-6P43688 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-6P43688 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-6P43688 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-6P43688 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.95■□□□□ 0.94
Nkx2-6P43688 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.95■□□□□ 0.94
Nkx2-6P43688 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-6P43688 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms