Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Pde6bP23440 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pde6bP23440 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Pde6bP23440 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Pde6bP23440 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC24.21■■□□□ 1.47
Pde6bP23440 Nsd1-203ENSMUST00000224156 1149 ntBASIC24.21■■□□□ 1.47
Pde6bP23440 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pde6bP23440 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC24.2■■□□□ 1.46
Pde6bP23440 Gm22567-201ENSMUST00000175542 342 ntBASIC24.2■■□□□ 1.46
Pde6bP23440 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pde6bP23440 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pde6bP23440 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pde6bP23440 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.19■■□□□ 1.46
Pde6bP23440 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pde6bP23440 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC24.18■■□□□ 1.46
Pde6bP23440 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pde6bP23440 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pde6bP23440 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Pde6bP23440 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pde6bP23440 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.17■■□□□ 1.46
Pde6bP23440 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pde6bP23440 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Pde6bP23440 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
Pde6bP23440 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pde6bP23440 Gm43566-201ENSMUST00000196851 808 ntBASIC24.16■■□□□ 1.46
Pde6bP23440 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pde6bP23440 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pde6bP23440 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pde6bP23440 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pde6bP23440 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pde6bP23440 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pde6bP23440 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pde6bP23440 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pde6bP23440 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pde6bP23440 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.15■■□□□ 1.46
Pde6bP23440 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pde6bP23440 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pde6bP23440 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pde6bP23440 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pde6bP23440 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pde6bP23440 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Pde6bP23440 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.13■■□□□ 1.45
Pde6bP23440 Gm13238-201ENSMUST00000117655 780 ntBASIC24.13■■□□□ 1.45
Pde6bP23440 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC24.13■■□□□ 1.45
Pde6bP23440 Gm45444-201ENSMUST00000211394 898 ntBASIC24.13■■□□□ 1.45
Pde6bP23440 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pde6bP23440 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Pde6bP23440 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pde6bP23440 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.13■■□□□ 1.45
Pde6bP23440 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Pde6bP23440 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pde6bP23440 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pde6bP23440 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pde6bP23440 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Pde6bP23440 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.1■■□□□ 1.45
Pde6bP23440 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC24.1■■□□□ 1.45
Pde6bP23440 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.1■■□□□ 1.45
Pde6bP23440 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Pde6bP23440 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pde6bP23440 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pde6bP23440 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Pde6bP23440 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.09■■□□□ 1.45
Pde6bP23440 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pde6bP23440 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pde6bP23440 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pde6bP23440 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Pde6bP23440 Gm15820-201ENSMUST00000201566 728 ntBASIC24.09■■□□□ 1.45
Pde6bP23440 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Pde6bP23440 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Pde6bP23440 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC24.08■■□□□ 1.45
Pde6bP23440 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Pde6bP23440 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pde6bP23440 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC24.08■■□□□ 1.45
Pde6bP23440 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pde6bP23440 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pde6bP23440 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pde6bP23440 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Pde6bP23440 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.06■■□□□ 1.44
Pde6bP23440 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pde6bP23440 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pde6bP23440 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pde6bP23440 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pde6bP23440 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC24.05■■□□□ 1.44
Pde6bP23440 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.05■■□□□ 1.44
Pde6bP23440 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pde6bP23440 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pde6bP23440 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pde6bP23440 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pde6bP23440 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC24.04■■□□□ 1.44
Pde6bP23440 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.04■■□□□ 1.44
Pde6bP23440 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pde6bP23440 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pde6bP23440 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pde6bP23440 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC24.03■■□□□ 1.44
Pde6bP23440 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24.03■■□□□ 1.44
Pde6bP23440 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.03■■□□□ 1.44
Pde6bP23440 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pde6bP23440 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pde6bP23440 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pde6bP23440 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms