Protein–RNA interactions for Protein: P20436

RPB8, DNA-directed RNA polymerases I, II, and III subunit RPABC3, yeastyeast

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB8P20436 YBR241CYBR241C 1467 nt6.03□□□□□ -1.44
RPB8P20436 SRF1YDL133W 1314 nt6.03□□□□□ -1.44
RPB8P20436 PPH21YDL134C 1110 nt6.03□□□□□ -1.44
RPB8P20436 YGR068W-AYGR068W-A 96 nt6.03□□□□□ -1.44
RPB8P20436 MIP1YOR330C 3765 nt6.03□□□□□ -1.44
RPB8P20436 PLB3YOL011W 2061 nt6.03□□□□□ -1.44
RPB8P20436 HSM3YBR272C 1443 nt6.02□□□□□ -1.45
RPB8P20436 YSC83YHR017W 1158 nt6.02□□□□□ -1.45
RPB8P20436 NTG1YAL015C 1200 nt6.02□□□□□ -1.45
RPB8P20436 RDN5-2RDN5-2 119 nt6.02□□□□□ -1.45
RPB8P20436 RDN5-3RDN5-3 119 nt6.02□□□□□ -1.45
RPB8P20436 RDN5-4RDN5-4 119 nt6.02□□□□□ -1.45
RPB8P20436 RDN5-5RDN5-5 119 nt6.02□□□□□ -1.45
RPB8P20436 ASR1YPR093C 867 nt6.02□□□□□ -1.45
RPB8P20436 HXT13YEL069C 1695 nt6.01□□□□□ -1.45
RPB8P20436 KIN1YDR122W 3195 nt6.01□□□□□ -1.45
RPB8P20436 YDL177CYDL177C 513 nt6.01□□□□□ -1.45
RPB8P20436 YMR034CYMR034C 1305 nt6□□□□□ -1.45
RPB8P20436 MRPL19YNL185C 477 nt6□□□□□ -1.45
RPB8P20436 YNR014WYNR014W 639 nt6□□□□□ -1.45
RPB8P20436 ATP4YPL078C 735 nt6□□□□□ -1.45
RPB8P20436 SSC1YJR045C 1965 nt6□□□□□ -1.45
RPB8P20436 DOT1YDR440W 1749 nt5.99□□□□□ -1.45
RPB8P20436 PPS1YBR276C 2424 nt5.99□□□□□ -1.45
RPB8P20436 FMP40YPL222W 2067 nt5.99□□□□□ -1.45
RPB8P20436 HOC1YJR075W 1191 nt5.99□□□□□ -1.45
RPB8P20436 CRH1YGR189C 1524 nt5.99□□□□□ -1.45
RPB8P20436 DAL4YIR028W 1908 nt5.98□□□□□ -1.45
RPB8P20436 HED1YDR014W-A 489 nt5.98□□□□□ -1.45
RPB8P20436 YFL013W-AYFL013W-A 804 nt5.98□□□□□ -1.45
RPB8P20436 COX16YJL003W 357 nt5.98□□□□□ -1.45
RPB8P20436 YKL077WYKL077W 1179 nt5.98□□□□□ -1.45
RPB8P20436 GFA1YKL104C 2154 nt5.98□□□□□ -1.45
RPB8P20436 AFG2YLR397C 2343 nt5.98□□□□□ -1.45
RPB8P20436 TOS2YGR221C 1869 nt5.98□□□□□ -1.45
RPB8P20436 YHR020WYHR020W 2067 nt5.97□□□□□ -1.45
RPB8P20436 TIF2YJL138C 1188 nt5.97□□□□□ -1.45
RPB8P20436 TIF1YKR059W 1188 nt5.97□□□□□ -1.45
RPB8P20436 SWD1YAR003W 1281 nt5.97□□□□□ -1.45
RPB8P20436 IRC11YOR013W 471 nt5.97□□□□□ -1.45
RPB8P20436 OST3YOR085W 1053 nt5.97□□□□□ -1.45
RPB8P20436 TMA46YOR091W 1038 nt5.97□□□□□ -1.45
RPB8P20436 YBR113WYBR113W 483 nt5.97□□□□□ -1.45
RPB8P20436 YNL040WYNL040W 1371 nt5.96□□□□□ -1.45
RPB8P20436 AIM3YBR108W 2844 nt5.96□□□□□ -1.46
RPB8P20436 CYS4YGR155W 1524 nt5.96□□□□□ -1.46
RPB8P20436 FET4YMR319C 1659 nt5.96□□□□□ -1.46
RPB8P20436 PPH22YDL188C 1134 nt5.96□□□□□ -1.46
RPB8P20436 RPL2BYIL018W 765 nt5.96□□□□□ -1.46
RPB8P20436 LIA1YJR070C 978 nt5.96□□□□□ -1.46
RPB8P20436 YKL018C-AYKL018C-A 300 nt5.96□□□□□ -1.46
RPB8P20436 HMT1YBR034C 1047 nt5.96□□□□□ -1.46
RPB8P20436 STT3YGL022W 2157 nt5.95□□□□□ -1.46
RPB8P20436 COQ1YBR003W 1422 nt5.95□□□□□ -1.46
RPB8P20436 LSC1YOR142W 990 nt5.95□□□□□ -1.46
RPB8P20436 SGE1YPR198W 1632 nt5.95□□□□□ -1.46
RPB8P20436 ELP3YPL086C 1674 nt5.94□□□□□ -1.46
RPB8P20436 YLL066CYLL066C 3618 nt5.94□□□□□ -1.46
RPB8P20436 ATG23YLR431C 1362 nt5.94□□□□□ -1.46
RPB8P20436 FCY22YER060W-A 1593 nt5.94□□□□□ -1.46
RPB8P20436 SHO1YER118C 1104 nt5.94□□□□□ -1.46
RPB8P20436 FZF1YGL254W 900 nt5.94□□□□□ -1.46
RPB8P20436 COS6YGR295C 1146 nt5.94□□□□□ -1.46
RPB8P20436 YNL092WYNL092W 1203 nt5.94□□□□□ -1.46
RPB8P20436 OCA1YNL099C 717 nt5.94□□□□□ -1.46
RPB8P20436 HOS2YGL194C 1359 nt5.93□□□□□ -1.46
RPB8P20436 BUD9YGR041W 1644 nt5.93□□□□□ -1.46
RPB8P20436 tG(GCC)BtG(GCC)B 71 nt5.93□□□□□ -1.46
RPB8P20436 SUF16tG(GCC)C 71 nt5.93□□□□□ -1.46
RPB8P20436 tG(GCC)D1tG(GCC)D1 71 nt5.93□□□□□ -1.46
RPB8P20436 tG(GCC)D2tG(GCC)D2 71 nt5.93□□□□□ -1.46
RPB8P20436 tG(GCC)EtG(GCC)E 71 nt5.93□□□□□ -1.46
RPB8P20436 SUF20tG(GCC)F1 71 nt5.93□□□□□ -1.46
RPB8P20436 tG(GCC)F2tG(GCC)F2 71 nt5.93□□□□□ -1.46
RPB8P20436 tG(GCC)G1tG(GCC)G1 71 nt5.93□□□□□ -1.46
RPB8P20436 tG(GCC)G2tG(GCC)G2 71 nt5.93□□□□□ -1.46
RPB8P20436 tG(GCC)J1tG(GCC)J1 71 nt5.93□□□□□ -1.46
RPB8P20436 SUF23tG(GCC)J2 71 nt5.93□□□□□ -1.46
RPB8P20436 tG(GCC)MtG(GCC)M 71 nt5.93□□□□□ -1.46
RPB8P20436 tG(GCC)O1tG(GCC)O1 71 nt5.93□□□□□ -1.46
RPB8P20436 SUF17tG(GCC)O2 71 nt5.93□□□□□ -1.46
RPB8P20436 tG(GCC)P1tG(GCC)P1 71 nt5.93□□□□□ -1.46
RPB8P20436 tG(GCC)P2tG(GCC)P2 71 nt5.93□□□□□ -1.46
RPB8P20436 YKL102CYKL102C 306 nt5.93□□□□□ -1.46
RPB8P20436 YNL017CYNL017C 339 nt5.93□□□□□ -1.46
RPB8P20436 SCO2YBR024W 906 nt5.93□□□□□ -1.46
RPB8P20436 YBR226CYBR226C 411 nt5.93□□□□□ -1.46
RPB8P20436 PPM2YOL141W 2088 nt5.93□□□□□ -1.46
RPB8P20436 PEX31YGR004W 1389 nt5.93□□□□□ -1.46
RPB8P20436 GPD1YDL022W 1176 nt5.92□□□□□ -1.46
RPB8P20436 REV7YIL139C 738 nt5.92□□□□□ -1.46
RPB8P20436 SRN2YLR119W 642 nt5.92□□□□□ -1.46
RPB8P20436 SLD7YOR060C 774 nt5.92□□□□□ -1.46
RPB8P20436 MRPL23YOR150W 492 nt5.92□□□□□ -1.46
RPB8P20436 DFR1YOR236W 636 nt5.92□□□□□ -1.46
RPB8P20436 RPL5YPL131W 894 nt5.92□□□□□ -1.46
RPB8P20436 LCL3YGL085W 825 nt5.91□□□□□ -1.46
RPB8P20436 FMO1YHR176W 1299 nt5.91□□□□□ -1.46
RPB8P20436 ASF1YJL115W 840 nt5.91□□□□□ -1.46
RPB8P20436 AVO2YMR068W 1281 nt5.91□□□□□ -1.46
Retrieved 100 of 7,029 protein–RNA pairs in 57.2 ms