Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
P20040 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
P20040 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
P20040 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
P20040 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
P20040 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
P20040 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
P20040 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
P20040 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
P20040 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
P20040 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
P20040 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
P20040 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
P20040 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
P20040 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
P20040 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
P20040 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
P20040 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
P20040 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
P20040 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.61■□□□□ 0.73
P20040 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
P20040 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
P20040 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
P20040 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.6■□□□□ 0.73
P20040 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
P20040 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
P20040 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
P20040 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
P20040 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.59■□□□□ 0.73
P20040 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
P20040 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.59■□□□□ 0.73
P20040 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.59■□□□□ 0.73
P20040 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
P20040 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
P20040 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
P20040 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
P20040 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.59■□□□□ 0.73
P20040 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
P20040 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
P20040 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
P20040 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
P20040 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
P20040 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
P20040 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
P20040 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
P20040 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.57■□□□□ 0.72
P20040 Mir3960-201ENSMUST00000198213 73 ntBASIC19.57■□□□□ 0.72
P20040 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.57■□□□□ 0.72
P20040 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
P20040 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.57■□□□□ 0.72
P20040 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.56■□□□□ 0.72
P20040 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
P20040 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.56■□□□□ 0.72
P20040 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P20040 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P20040 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
P20040 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
P20040 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P20040 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
P20040 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.56■□□□□ 0.72
P20040 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P20040 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
P20040 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
P20040 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P20040 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P20040 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
P20040 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
P20040 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.54■□□□□ 0.72
P20040 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.54■□□□□ 0.72
P20040 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P20040 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
P20040 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P20040 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.53■□□□□ 0.72
P20040 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P20040 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
P20040 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P20040 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
P20040 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P20040 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.52■□□□□ 0.72
P20040 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.52■□□□□ 0.72
P20040 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
P20040 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
P20040 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P20040 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P20040 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P20040 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
P20040 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P20040 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
P20040 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P20040 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P20040 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P20040 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.5■□□□□ 0.71
P20040 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P20040 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.5■□□□□ 0.71
P20040 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P20040 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P20040 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P20040 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P20040 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
P20040 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms