Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pfdn2O70591 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pfdn2O70591 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pfdn2O70591 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pfdn2O70591 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.38■□□□□ 0.53
Pfdn2O70591 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pfdn2O70591 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pfdn2O70591 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.37■□□□□ 0.53
Pfdn2O70591 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pfdn2O70591 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pfdn2O70591 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pfdn2O70591 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pfdn2O70591 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.36■□□□□ 0.53
Pfdn2O70591 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Pfdn2O70591 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pfdn2O70591 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pfdn2O70591 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pfdn2O70591 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Pfdn2O70591 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pfdn2O70591 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pfdn2O70591 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pfdn2O70591 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pfdn2O70591 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pfdn2O70591 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pfdn2O70591 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pfdn2O70591 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pfdn2O70591 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pfdn2O70591 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pfdn2O70591 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pfdn2O70591 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pfdn2O70591 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.34■□□□□ 0.53
Pfdn2O70591 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pfdn2O70591 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pfdn2O70591 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pfdn2O70591 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pfdn2O70591 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Pfdn2O70591 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Pfdn2O70591 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.33■□□□□ 0.52
Pfdn2O70591 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pfdn2O70591 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.33■□□□□ 0.52
Pfdn2O70591 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pfdn2O70591 Notumos-201ENSMUST00000151998 2659 ntBASIC18.33■□□□□ 0.52
Pfdn2O70591 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Pfdn2O70591 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pfdn2O70591 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pfdn2O70591 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pfdn2O70591 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.32■□□□□ 0.52
Pfdn2O70591 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pfdn2O70591 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pfdn2O70591 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.31■□□□□ 0.52
Pfdn2O70591 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pfdn2O70591 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pfdn2O70591 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pfdn2O70591 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn2O70591 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn2O70591 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn2O70591 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn2O70591 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn2O70591 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn2O70591 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn2O70591 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pfdn2O70591 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn2O70591 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pfdn2O70591 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pfdn2O70591 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.29■□□□□ 0.52
Pfdn2O70591 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pfdn2O70591 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pfdn2O70591 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pfdn2O70591 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pfdn2O70591 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pfdn2O70591 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pfdn2O70591 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pfdn2O70591 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pfdn2O70591 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Pfdn2O70591 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pfdn2O70591 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pfdn2O70591 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.28■□□□□ 0.52
Pfdn2O70591 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pfdn2O70591 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pfdn2O70591 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pfdn2O70591 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Pfdn2O70591 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pfdn2O70591 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pfdn2O70591 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Pfdn2O70591 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pfdn2O70591 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pfdn2O70591 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pfdn2O70591 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pfdn2O70591 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pfdn2O70591 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pfdn2O70591 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pfdn2O70591 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pfdn2O70591 Particl-201ENSMUST00000205370 1560 ntBASIC18.25■□□□□ 0.51
Pfdn2O70591 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pfdn2O70591 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pfdn2O70591 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pfdn2O70591 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pfdn2O70591 Gm30023-201ENSMUST00000197970 889 ntBASIC18.24■□□□□ 0.51
Pfdn2O70591 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pfdn2O70591 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms