Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 TRS31YDR472W 852 nt9.95□□□□□ -0.82
TY1B-HO13535 MTC2YKL098W 1074 nt9.95□□□□□ -0.82
TY1B-HO13535 YHR020WYHR020W 2067 nt9.95□□□□□ -0.82
TY1B-HO13535 MAE1YKL029C 2010 nt9.95□□□□□ -0.82
TY1B-HO13535 MAK31YCR020C-A 267 nt9.94□□□□□ -0.82
TY1B-HO13535 CDC19YAL038W 1503 nt9.94□□□□□ -0.82
TY1B-HO13535 RPE1YJL121C 717 nt9.93□□□□□ -0.82
TY1B-HO13535 YPL257WYPL257W 582 nt9.93□□□□□ -0.82
TY1B-HO13535 YET3YDL072C 612 nt9.93□□□□□ -0.82
TY1B-HO13535 YDL177CYDL177C 513 nt9.93□□□□□ -0.82
TY1B-HO13535 FAL1YDR021W 1200 nt9.92□□□□□ -0.82
TY1B-HO13535 STT3YGL022W 2157 nt9.91□□□□□ -0.82
TY1B-HO13535 YBR241CYBR241C 1467 nt9.91□□□□□ -0.82
TY1B-HO13535 ATG36YJL185C 882 nt9.91□□□□□ -0.82
TY1B-HO13535 MDE1YJR024C 735 nt9.9□□□□□ -0.82
TY1B-HO13535 TMA46YOR091W 1038 nt9.9□□□□□ -0.82
TY1B-HO13535 HSV2YGR223C 1347 nt9.9□□□□□ -0.82
TY1B-HO13535 CEM1YER061C 1329 nt9.88□□□□□ -0.83
TY1B-HO13535 YJR154WYJR154W 1041 nt9.88□□□□□ -0.83
TY1B-HO13535 CTF19YPL018W 1110 nt9.88□□□□□ -0.83
TY1B-HO13535 TUF1YOR187W 1314 nt9.88□□□□□ -0.83
TY1B-HO13535 SKS1YPL026C 1509 nt9.87□□□□□ -0.83
TY1B-HO13535 HST3YOR025W 1344 nt9.87□□□□□ -0.83
TY1B-HO13535 ADY2YCR010C 852 nt9.87□□□□□ -0.83
TY1B-HO13535 tG(GCC)BtG(GCC)B 71 nt9.87□□□□□ -0.83
TY1B-HO13535 SUF16tG(GCC)C 71 nt9.87□□□□□ -0.83
TY1B-HO13535 tG(GCC)D1tG(GCC)D1 71 nt9.87□□□□□ -0.83
TY1B-HO13535 tG(GCC)D2tG(GCC)D2 71 nt9.87□□□□□ -0.83
TY1B-HO13535 tG(GCC)EtG(GCC)E 71 nt9.87□□□□□ -0.83
TY1B-HO13535 SUF20tG(GCC)F1 71 nt9.87□□□□□ -0.83
TY1B-HO13535 tG(GCC)F2tG(GCC)F2 71 nt9.87□□□□□ -0.83
TY1B-HO13535 tG(GCC)G1tG(GCC)G1 71 nt9.87□□□□□ -0.83
TY1B-HO13535 tG(GCC)G2tG(GCC)G2 71 nt9.87□□□□□ -0.83
TY1B-HO13535 tG(GCC)J1tG(GCC)J1 71 nt9.87□□□□□ -0.83
TY1B-HO13535 SUF23tG(GCC)J2 71 nt9.87□□□□□ -0.83
TY1B-HO13535 tG(GCC)MtG(GCC)M 71 nt9.87□□□□□ -0.83
TY1B-HO13535 tG(GCC)O1tG(GCC)O1 71 nt9.87□□□□□ -0.83
TY1B-HO13535 SUF17tG(GCC)O2 71 nt9.87□□□□□ -0.83
TY1B-HO13535 tG(GCC)P1tG(GCC)P1 71 nt9.87□□□□□ -0.83
TY1B-HO13535 tG(GCC)P2tG(GCC)P2 71 nt9.87□□□□□ -0.83
TY1B-HO13535 SKG1YKR100C 1068 nt9.87□□□□□ -0.83
TY1B-HO13535 AMD2YDR242W 1650 nt9.86□□□□□ -0.83
TY1B-HO13535 RPS5YJR123W 678 nt9.86□□□□□ -0.83
TY1B-HO13535 SSP120YLR250W 705 nt9.86□□□□□ -0.83
TY1B-HO13535 MIX17YMR002W 471 nt9.86□□□□□ -0.83
TY1B-HO13535 ISN1YOR155C 1353 nt9.84□□□□□ -0.83
TY1B-HO13535 RHB1YCR027C 630 nt9.84□□□□□ -0.83
TY1B-HO13535 RPP1YHR062C 882 nt9.84□□□□□ -0.83
TY1B-HO13535 CCC2YDR270W 3015 nt9.84□□□□□ -0.83
TY1B-HO13535 TDP1YBR223C 1635 nt9.83□□□□□ -0.84
TY1B-HO13535 RFS1YBR052C 633 nt9.83□□□□□ -0.84
TY1B-HO13535 YJR146WYJR146W 354 nt9.83□□□□□ -0.84
TY1B-HO13535 GTO3YMR251W 1101 nt9.82□□□□□ -0.84
TY1B-HO13535 KTR3YBR205W 1215 nt9.82□□□□□ -0.84
TY1B-HO13535 MRPL28YDR462W 444 nt9.81□□□□□ -0.84
TY1B-HO13535 GAT4YIR013C 366 nt9.81□□□□□ -0.84
TY1B-HO13535 RUF23RUF23 254 nt9.81□□□□□ -0.84
TY1B-HO13535 snR82snR82 268 nt9.8□□□□□ -0.84
TY1B-HO13535 YJR084WYJR084W 1272 nt9.8□□□□□ -0.84
TY1B-HO13535 PRS2YER099C 957 nt9.8□□□□□ -0.84
TY1B-HO13535 SPT3YDR392W 1014 nt9.79□□□□□ -0.84
TY1B-HO13535 CAF40YNL288W 1122 nt9.79□□□□□ -0.84
TY1B-HO13535 PPT1YGR123C 1542 nt9.79□□□□□ -0.84
TY1B-HO13535 CRF1YDR223W 1404 nt9.79□□□□□ -0.84
TY1B-HO13535 HRQ1YDR291W 3234 nt9.78□□□□□ -0.84
TY1B-HO13535 PAC2YER007W 1557 nt9.77□□□□□ -0.84
TY1B-HO13535 BUG1YDL099W 1026 nt9.77□□□□□ -0.85
TY1B-HO13535 JNM1YMR294W 1122 nt9.77□□□□□ -0.85
TY1B-HO13535 YNL042W-BYNL042W-B 258 nt9.77□□□□□ -0.85
TY1B-HO13535 RFC4YOL094C 972 nt9.77□□□□□ -0.85
TY1B-HO13535 COX10YPL172C 1389 nt9.76□□□□□ -0.85
TY1B-HO13535 ICL1YER065C 1674 nt9.75□□□□□ -0.85
TY1B-HO13535 MAL31YBR298C 1845 nt9.75□□□□□ -0.85
TY1B-HO13535 YFL013W-AYFL013W-A 804 nt9.74□□□□□ -0.85
TY1B-HO13535 YPR160C-AYPR160C-A 285 nt9.74□□□□□ -0.85
TY1B-HO13535 FLC2YAL053W 2352 nt9.73□□□□□ -0.85
TY1B-HO13535 MRP17YKL003C 396 nt9.73□□□□□ -0.85
TY1B-HO13535 AIM33YML087C 939 nt9.73□□□□□ -0.85
TY1B-HO13535 ARG1YOL058W 1263 nt9.73□□□□□ -0.85
TY1B-HO13535 LDB18YLL049W 540 nt9.72□□□□□ -0.85
TY1B-HO13535 YOR342CYOR342C 960 nt9.72□□□□□ -0.85
TY1B-HO13535 EDE1YBL047C 4146 nt9.72□□□□□ -0.85
TY1B-HO13535 ILV1YER086W 1731 nt9.71□□□□□ -0.85
TY1B-HO13535 RMD8YFR048W 1989 nt9.71□□□□□ -0.86
TY1B-HO13535 YDL022C-AYDL022C-A 249 nt9.7□□□□□ -0.86
TY1B-HO13535 DFR1YOR236W 636 nt9.7□□□□□ -0.86
TY1B-HO13535 SNT309YPR101W 528 nt9.7□□□□□ -0.86
TY1B-HO13535 ADE12YNL220W 1302 nt9.69□□□□□ -0.86
TY1B-HO13535 LDB16YCL005W 771 nt9.69□□□□□ -0.86
TY1B-HO13535 YML012C-AYML012C-A 378 nt9.68□□□□□ -0.86
TY1B-HO13535 AQR1YNL065W 1761 nt9.68□□□□□ -0.86
TY1B-HO13535 YKR018CYKR018C 2178 nt9.68□□□□□ -0.86
TY1B-HO13535 YDL119CYDL119C 924 nt9.68□□□□□ -0.86
TY1B-HO13535 RPS3YNL178W 723 nt9.68□□□□□ -0.86
TY1B-HO13535 ENB1YOL158C 1821 nt9.68□□□□□ -0.86
TY1B-HO13535 RPR2YIR015W 435 nt9.67□□□□□ -0.86
TY1B-HO13535 SFP1YLR403W 2052 nt9.66□□□□□ -0.86
TY1B-HO13535 COX20YDR231C 618 nt9.65□□□□□ -0.86
TY1B-HO13535 CAN1YEL063C 1773 nt9.65□□□□□ -0.86
TY1B-HO13535 OPI11YPR044C 354 nt9.65□□□□□ -0.87
Retrieved 100 of 7,029 protein–RNA pairs in 26 ms