Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdh11xF6ZNL5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdh11xF6ZNL5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdh11xF6ZNL5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdh11xF6ZNL5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdh11xF6ZNL5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdh11xF6ZNL5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdh11xF6ZNL5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC24.75■■□□□ 1.55
Pcdh11xF6ZNL5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdh11xF6ZNL5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdh11xF6ZNL5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdh11xF6ZNL5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdh11xF6ZNL5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.74■■□□□ 1.55
Pcdh11xF6ZNL5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Pcdh11xF6ZNL5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Pcdh11xF6ZNL5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Pcdh11xF6ZNL5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdh11xF6ZNL5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdh11xF6ZNL5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdh11xF6ZNL5 Gm6934-201ENSMUST00000194780 1905 ntBASIC24.73■■□□□ 1.55
Pcdh11xF6ZNL5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdh11xF6ZNL5 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdh11xF6ZNL5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdh11xF6ZNL5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdh11xF6ZNL5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdh11xF6ZNL5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Pcdh11xF6ZNL5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.71■■□□□ 1.55
Pcdh11xF6ZNL5 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdh11xF6ZNL5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdh11xF6ZNL5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdh11xF6ZNL5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24.71■■□□□ 1.55
Pcdh11xF6ZNL5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Pcdh11xF6ZNL5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.7■■□□□ 1.54
Pcdh11xF6ZNL5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdh11xF6ZNL5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
Pcdh11xF6ZNL5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdh11xF6ZNL5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdh11xF6ZNL5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdh11xF6ZNL5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.69■■□□□ 1.54
Pcdh11xF6ZNL5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.69■■□□□ 1.54
Pcdh11xF6ZNL5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdh11xF6ZNL5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdh11xF6ZNL5 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.68■■□□□ 1.54
Pcdh11xF6ZNL5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdh11xF6ZNL5 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Pcdh11xF6ZNL5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdh11xF6ZNL5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdh11xF6ZNL5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Pcdh11xF6ZNL5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdh11xF6ZNL5 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Pcdh11xF6ZNL5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdh11xF6ZNL5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdh11xF6ZNL5 Gm7199-201ENSMUST00000118327 1485 ntBASIC24.66■■□□□ 1.54
Pcdh11xF6ZNL5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdh11xF6ZNL5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdh11xF6ZNL5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Pcdh11xF6ZNL5 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdh11xF6ZNL5 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.65■■□□□ 1.54
Pcdh11xF6ZNL5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdh11xF6ZNL5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Pcdh11xF6ZNL5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdh11xF6ZNL5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdh11xF6ZNL5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.65■■□□□ 1.54
Pcdh11xF6ZNL5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC24.64■■□□□ 1.54
Pcdh11xF6ZNL5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdh11xF6ZNL5 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdh11xF6ZNL5 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdh11xF6ZNL5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdh11xF6ZNL5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC24.64■■□□□ 1.53
Pcdh11xF6ZNL5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdh11xF6ZNL5 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdh11xF6ZNL5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdh11xF6ZNL5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdh11xF6ZNL5 Gm28731-201ENSMUST00000185564 1569 ntBASIC24.62■■□□□ 1.53
Pcdh11xF6ZNL5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdh11xF6ZNL5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC24.62■■□□□ 1.53
Pcdh11xF6ZNL5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdh11xF6ZNL5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdh11xF6ZNL5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdh11xF6ZNL5 Cap2-205ENSMUST00000225824 1634 ntBASIC24.61■■□□□ 1.53
Pcdh11xF6ZNL5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdh11xF6ZNL5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.61■■□□□ 1.53
Pcdh11xF6ZNL5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdh11xF6ZNL5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Pcdh11xF6ZNL5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdh11xF6ZNL5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdh11xF6ZNL5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdh11xF6ZNL5 Scarna2-201ENSMUST00000157560 414 ntBASIC24.6■■□□□ 1.53
Pcdh11xF6ZNL5 Gm9806-201ENSMUST00000051080 552 ntBASIC24.6■■□□□ 1.53
Pcdh11xF6ZNL5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdh11xF6ZNL5 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdh11xF6ZNL5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdh11xF6ZNL5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
Pcdh11xF6ZNL5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdh11xF6ZNL5 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Pcdh11xF6ZNL5 Gm11687-201ENSMUST00000118911 886 ntBASIC24.58■■□□□ 1.52
Pcdh11xF6ZNL5 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.57■■□□□ 1.52
Pcdh11xF6ZNL5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdh11xF6ZNL5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdh11xF6ZNL5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.56■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms