Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Zc3h13E9Q784 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Zc3h13E9Q784 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
Zc3h13E9Q784 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
Zc3h13E9Q784 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Zc3h13E9Q784 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
Zc3h13E9Q784 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC31.89■■■□□ 2.7
Zc3h13E9Q784 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Zc3h13E9Q784 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC31.89■■■□□ 2.69
Zc3h13E9Q784 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Zc3h13E9Q784 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Zc3h13E9Q784 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Zc3h13E9Q784 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Zc3h13E9Q784 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Zc3h13E9Q784 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Zc3h13E9Q784 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Zc3h13E9Q784 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Zc3h13E9Q784 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Zc3h13E9Q784 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
Zc3h13E9Q784 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Zc3h13E9Q784 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Zc3h13E9Q784 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
Zc3h13E9Q784 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Zc3h13E9Q784 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC31.84■■■□□ 2.69
Zc3h13E9Q784 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Zc3h13E9Q784 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Zc3h13E9Q784 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC31.83■■■□□ 2.69
Zc3h13E9Q784 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
Zc3h13E9Q784 AC117769.4-201ENSMUST00000225679 685 ntBASIC31.83■■■□□ 2.69
Zc3h13E9Q784 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Zc3h13E9Q784 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC31.82■■■□□ 2.69
Zc3h13E9Q784 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
Zc3h13E9Q784 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Zc3h13E9Q784 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
Zc3h13E9Q784 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Zc3h13E9Q784 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Zc3h13E9Q784 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Zc3h13E9Q784 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC31.8■■■□□ 2.68
Zc3h13E9Q784 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Zc3h13E9Q784 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Zc3h13E9Q784 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Zc3h13E9Q784 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Zc3h13E9Q784 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Zc3h13E9Q784 Gm13241-201ENSMUST00000094493 780 ntBASIC31.8■■■□□ 2.68
Zc3h13E9Q784 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
Zc3h13E9Q784 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
Zc3h13E9Q784 Gm10232-201ENSMUST00000089221 720 ntBASIC31.79■■■□□ 2.68
Zc3h13E9Q784 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
Zc3h13E9Q784 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Zc3h13E9Q784 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Zc3h13E9Q784 Gm21956-201ENSMUST00000179946 522 ntBASIC31.78■■■□□ 2.68
Zc3h13E9Q784 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Zc3h13E9Q784 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Zc3h13E9Q784 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
Zc3h13E9Q784 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Zc3h13E9Q784 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC31.76■■■□□ 2.68
Zc3h13E9Q784 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
Zc3h13E9Q784 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC31.76■■■□□ 2.67
Zc3h13E9Q784 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC31.76■■■□□ 2.67
Zc3h13E9Q784 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Zc3h13E9Q784 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
Zc3h13E9Q784 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
Zc3h13E9Q784 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC31.75■■■□□ 2.67
Zc3h13E9Q784 Etf1-202ENSMUST00000180351 108 ntBASIC31.75■■■□□ 2.67
Zc3h13E9Q784 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC31.75■■■□□ 2.67
Zc3h13E9Q784 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Zc3h13E9Q784 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Zc3h13E9Q784 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC31.75■■■□□ 2.67
Zc3h13E9Q784 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC31.74■■■□□ 2.67
Zc3h13E9Q784 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
Zc3h13E9Q784 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Zc3h13E9Q784 Gm5131-201ENSMUST00000212776 1238 ntBASIC31.73■■■□□ 2.67
Zc3h13E9Q784 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Zc3h13E9Q784 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Zc3h13E9Q784 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Zc3h13E9Q784 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
Zc3h13E9Q784 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC31.72■■■□□ 2.67
Zc3h13E9Q784 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Zc3h13E9Q784 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Zc3h13E9Q784 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC31.71■■■□□ 2.67
Zc3h13E9Q784 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC31.71■■■□□ 2.67
Zc3h13E9Q784 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC31.7■■■□□ 2.67
Zc3h13E9Q784 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.66
Zc3h13E9Q784 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC31.69■■■□□ 2.66
Zc3h13E9Q784 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Zc3h13E9Q784 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Zc3h13E9Q784 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Zc3h13E9Q784 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC31.69■■■□□ 2.66
Zc3h13E9Q784 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Zc3h13E9Q784 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Zc3h13E9Q784 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Zc3h13E9Q784 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Zc3h13E9Q784 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Zc3h13E9Q784 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Zc3h13E9Q784 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
Zc3h13E9Q784 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
Zc3h13E9Q784 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
Zc3h13E9Q784 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC31.67■■■□□ 2.66
Zc3h13E9Q784 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Zc3h13E9Q784 Amer2-203ENSMUST00000225247 2662 ntBASIC31.66■■■□□ 2.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms