Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dchs1E9PVD3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Dchs1E9PVD3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Dchs1E9PVD3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dchs1E9PVD3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Dchs1E9PVD3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dchs1E9PVD3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Dchs1E9PVD3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.18■□□□□ 0.82
Dchs1E9PVD3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.18■□□□□ 0.82
Dchs1E9PVD3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dchs1E9PVD3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.17■□□□□ 0.82
Dchs1E9PVD3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dchs1E9PVD3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dchs1E9PVD3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dchs1E9PVD3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Dchs1E9PVD3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Dchs1E9PVD3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Dchs1E9PVD3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Dchs1E9PVD3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dchs1E9PVD3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Dchs1E9PVD3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Dchs1E9PVD3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Dchs1E9PVD3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Dchs1E9PVD3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Dchs1E9PVD3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Dchs1E9PVD3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Dchs1E9PVD3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dchs1E9PVD3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.13■□□□□ 0.81
Dchs1E9PVD3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dchs1E9PVD3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.13■□□□□ 0.81
Dchs1E9PVD3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dchs1E9PVD3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dchs1E9PVD3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Dchs1E9PVD3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.13■□□□□ 0.81
Dchs1E9PVD3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Dchs1E9PVD3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Dchs1E9PVD3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.12■□□□□ 0.81
Dchs1E9PVD3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Dchs1E9PVD3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Dchs1E9PVD3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Dchs1E9PVD3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.12■□□□□ 0.81
Dchs1E9PVD3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Dchs1E9PVD3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Dchs1E9PVD3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Dchs1E9PVD3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.12■□□□□ 0.81
Dchs1E9PVD3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.12■□□□□ 0.81
Dchs1E9PVD3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Dchs1E9PVD3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dchs1E9PVD3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dchs1E9PVD3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.11■□□□□ 0.81
Dchs1E9PVD3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dchs1E9PVD3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dchs1E9PVD3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.11■□□□□ 0.81
Dchs1E9PVD3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dchs1E9PVD3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Dchs1E9PVD3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Dchs1E9PVD3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.1■□□□□ 0.81
Dchs1E9PVD3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Dchs1E9PVD3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Dchs1E9PVD3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.1■□□□□ 0.81
Dchs1E9PVD3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.1■□□□□ 0.81
Dchs1E9PVD3 Gm21956-201ENSMUST00000179946 522 ntBASIC20.1■□□□□ 0.81
Dchs1E9PVD3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dchs1E9PVD3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dchs1E9PVD3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
Dchs1E9PVD3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.09■□□□□ 0.81
Dchs1E9PVD3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dchs1E9PVD3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.08■□□□□ 0.81
Dchs1E9PVD3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dchs1E9PVD3 Terc-201ENSMUST00000082862 423 ntBASIC20.08■□□□□ 0.81
Dchs1E9PVD3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.07■□□□□ 0.8
Dchs1E9PVD3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Dchs1E9PVD3 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.07■□□□□ 0.8
Dchs1E9PVD3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Dchs1E9PVD3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Dchs1E9PVD3 Gm44428-201ENSMUST00000204474 874 ntBASIC20.07■□□□□ 0.8
Dchs1E9PVD3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Dchs1E9PVD3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dchs1E9PVD3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.06■□□□□ 0.8
Dchs1E9PVD3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Dchs1E9PVD3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.06■□□□□ 0.8
Dchs1E9PVD3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dchs1E9PVD3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dchs1E9PVD3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.05■□□□□ 0.8
Dchs1E9PVD3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dchs1E9PVD3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Dchs1E9PVD3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Dchs1E9PVD3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dchs1E9PVD3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dchs1E9PVD3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.04■□□□□ 0.8
Dchs1E9PVD3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.04■□□□□ 0.8
Dchs1E9PVD3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dchs1E9PVD3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dchs1E9PVD3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.03■□□□□ 0.8
Dchs1E9PVD3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dchs1E9PVD3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Dchs1E9PVD3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dchs1E9PVD3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dchs1E9PVD3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Dchs1E9PVD3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 164.1 ms