Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trbv17A0A140T8P8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv17A0A140T8P8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trbv17A0A140T8P8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.94■□□□□ 0.3
Trbv17A0A140T8P8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv17A0A140T8P8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.94■□□□□ 0.3
Trbv17A0A140T8P8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv17A0A140T8P8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv17A0A140T8P8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv17A0A140T8P8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv17A0A140T8P8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv17A0A140T8P8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv17A0A140T8P8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv17A0A140T8P8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv17A0A140T8P8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv17A0A140T8P8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv17A0A140T8P8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trbv17A0A140T8P8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv17A0A140T8P8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv17A0A140T8P8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trbv17A0A140T8P8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv17A0A140T8P8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv17A0A140T8P8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv17A0A140T8P8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.92■□□□□ 0.3
Trbv17A0A140T8P8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv17A0A140T8P8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv17A0A140T8P8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv17A0A140T8P8 Terc-201ENSMUST00000082862 423 ntBASIC16.91■□□□□ 0.3
Trbv17A0A140T8P8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv17A0A140T8P8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv17A0A140T8P8 Scarna2-201ENSMUST00000157560 414 ntBASIC16.9■□□□□ 0.3
Trbv17A0A140T8P8 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.9■□□□□ 0.3
Trbv17A0A140T8P8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv17A0A140T8P8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Trbv17A0A140T8P8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv17A0A140T8P8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.89■□□□□ 0.29
Trbv17A0A140T8P8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv17A0A140T8P8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv17A0A140T8P8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.89■□□□□ 0.29
Trbv17A0A140T8P8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv17A0A140T8P8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trbv17A0A140T8P8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv17A0A140T8P8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv17A0A140T8P8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trbv17A0A140T8P8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv17A0A140T8P8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trbv17A0A140T8P8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv17A0A140T8P8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv17A0A140T8P8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.88■□□□□ 0.29
Trbv17A0A140T8P8 Gm16437-201ENSMUST00000025669 507 ntBASIC16.88■□□□□ 0.29
Trbv17A0A140T8P8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv17A0A140T8P8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trbv17A0A140T8P8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Trbv17A0A140T8P8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv17A0A140T8P8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv17A0A140T8P8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv17A0A140T8P8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv17A0A140T8P8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.87■□□□□ 0.29
Trbv17A0A140T8P8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv17A0A140T8P8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv17A0A140T8P8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv17A0A140T8P8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.87■□□□□ 0.29
Trbv17A0A140T8P8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
Trbv17A0A140T8P8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv17A0A140T8P8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trbv17A0A140T8P8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv17A0A140T8P8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv17A0A140T8P8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv17A0A140T8P8 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.85■□□□□ 0.29
Trbv17A0A140T8P8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trbv17A0A140T8P8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trbv17A0A140T8P8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv17A0A140T8P8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.85■□□□□ 0.29
Trbv17A0A140T8P8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv17A0A140T8P8 Gm9806-201ENSMUST00000051080 552 ntBASIC16.85■□□□□ 0.29
Trbv17A0A140T8P8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv17A0A140T8P8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.85■□□□□ 0.29
Trbv17A0A140T8P8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.85■□□□□ 0.29
Trbv17A0A140T8P8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv17A0A140T8P8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv17A0A140T8P8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv17A0A140T8P8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv17A0A140T8P8 Gm11687-201ENSMUST00000118911 886 ntBASIC16.84■□□□□ 0.29
Trbv17A0A140T8P8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv17A0A140T8P8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv17A0A140T8P8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trbv17A0A140T8P8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv17A0A140T8P8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trbv17A0A140T8P8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trbv17A0A140T8P8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Trbv17A0A140T8P8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv17A0A140T8P8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trbv17A0A140T8P8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv17A0A140T8P8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trbv17A0A140T8P8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.83■□□□□ 0.28
Trbv17A0A140T8P8 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.83■□□□□ 0.28
Trbv17A0A140T8P8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv17A0A140T8P8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv17A0A140T8P8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trbv17A0A140T8P8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms