Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-2A0A0G2JF93 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-2A0A0G2JF93 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav13n-2A0A0G2JF93 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-2A0A0G2JF93 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-2A0A0G2JF93 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-2A0A0G2JF93 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav13n-2A0A0G2JF93 Dmtn-209ENSMUST00000228295 2572 ntBASIC14.72□□□□□ -0.05
Trav13n-2A0A0G2JF93 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-2A0A0G2JF93 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-2A0A0G2JF93 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-2A0A0G2JF93 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-2A0A0G2JF93 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-2A0A0G2JF93 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-2A0A0G2JF93 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav13n-2A0A0G2JF93 Particl-201ENSMUST00000205370 1560 ntBASIC14.71□□□□□ -0.05
Trav13n-2A0A0G2JF93 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav13n-2A0A0G2JF93 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav13n-2A0A0G2JF93 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav13n-2A0A0G2JF93 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC14.71□□□□□ -0.06
Trav13n-2A0A0G2JF93 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-2A0A0G2JF93 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.7□□□□□ -0.06
Trav13n-2A0A0G2JF93 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav13n-2A0A0G2JF93 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-2A0A0G2JF93 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-2A0A0G2JF93 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-2A0A0G2JF93 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-2A0A0G2JF93 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav13n-2A0A0G2JF93 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-2A0A0G2JF93 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-2A0A0G2JF93 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Trav13n-2A0A0G2JF93 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav13n-2A0A0G2JF93 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13n-2A0A0G2JF93 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13n-2A0A0G2JF93 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13n-2A0A0G2JF93 Gm24804-201ENSMUST00000174982 85 ntBASIC14.69□□□□□ -0.06
Trav13n-2A0A0G2JF93 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13n-2A0A0G2JF93 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13n-2A0A0G2JF93 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13n-2A0A0G2JF93 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13n-2A0A0G2JF93 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav13n-2A0A0G2JF93 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav13n-2A0A0G2JF93 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav13n-2A0A0G2JF93 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13n-2A0A0G2JF93 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav13n-2A0A0G2JF93 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav13n-2A0A0G2JF93 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13n-2A0A0G2JF93 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13n-2A0A0G2JF93 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13n-2A0A0G2JF93 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13n-2A0A0G2JF93 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13n-2A0A0G2JF93 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13n-2A0A0G2JF93 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav13n-2A0A0G2JF93 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13n-2A0A0G2JF93 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13n-2A0A0G2JF93 Gm16148-201ENSMUST00000119653 893 ntBASIC14.67□□□□□ -0.06
Trav13n-2A0A0G2JF93 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13n-2A0A0G2JF93 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13n-2A0A0G2JF93 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13n-2A0A0G2JF93 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13n-2A0A0G2JF93 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.67□□□□□ -0.06
Trav13n-2A0A0G2JF93 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-2A0A0G2JF93 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-2A0A0G2JF93 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-2A0A0G2JF93 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-2A0A0G2JF93 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-2A0A0G2JF93 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-2A0A0G2JF93 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-2A0A0G2JF93 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-2A0A0G2JF93 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-2A0A0G2JF93 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-2A0A0G2JF93 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav13n-2A0A0G2JF93 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-2A0A0G2JF93 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13n-2A0A0G2JF93 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13n-2A0A0G2JF93 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13n-2A0A0G2JF93 Gm38160-201ENSMUST00000193090 2499 ntBASIC14.65□□□□□ -0.06
Trav13n-2A0A0G2JF93 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13n-2A0A0G2JF93 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13n-2A0A0G2JF93 Gm13042-201ENSMUST00000119244 1955 ntBASIC14.65□□□□□ -0.06
Trav13n-2A0A0G2JF93 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav13n-2A0A0G2JF93 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-2A0A0G2JF93 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav13n-2A0A0G2JF93 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-2A0A0G2JF93 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-2A0A0G2JF93 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-2A0A0G2JF93 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-2A0A0G2JF93 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-2A0A0G2JF93 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-2A0A0G2JF93 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav13n-2A0A0G2JF93 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-2A0A0G2JF93 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-2A0A0G2JF93 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-2A0A0G2JF93 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-2A0A0G2JF93 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Trav13n-2A0A0G2JF93 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-2A0A0G2JF93 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-2A0A0G2JF93 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav13n-2A0A0G2JF93 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-2A0A0G2JF93 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms