Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-4A0A075B6B4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-4A0A075B6B4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-4A0A075B6B4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trav6-4A0A075B6B4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.13■□□□□ 0.33
Trav6-4A0A075B6B4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-4A0A075B6B4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-4A0A075B6B4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-4A0A075B6B4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-4A0A075B6B4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trav6-4A0A075B6B4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-4A0A075B6B4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-4A0A075B6B4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-4A0A075B6B4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-4A0A075B6B4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.11■□□□□ 0.33
Trav6-4A0A075B6B4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-4A0A075B6B4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.11■□□□□ 0.33
Trav6-4A0A075B6B4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.11■□□□□ 0.33
Trav6-4A0A075B6B4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-4A0A075B6B4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trav6-4A0A075B6B4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-4A0A075B6B4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-4A0A075B6B4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav6-4A0A075B6B4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-4A0A075B6B4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav6-4A0A075B6B4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-4A0A075B6B4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav6-4A0A075B6B4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-4A0A075B6B4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trav6-4A0A075B6B4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-4A0A075B6B4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-4A0A075B6B4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-4A0A075B6B4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trav6-4A0A075B6B4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-4A0A075B6B4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-4A0A075B6B4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav6-4A0A075B6B4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav6-4A0A075B6B4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav6-4A0A075B6B4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trav6-4A0A075B6B4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-4A0A075B6B4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-4A0A075B6B4 Gm11175-201ENSMUST00000116172 543 ntBASIC17.08■□□□□ 0.32
Trav6-4A0A075B6B4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trav6-4A0A075B6B4 Gm44428-201ENSMUST00000204474 874 ntBASIC17.08■□□□□ 0.32
Trav6-4A0A075B6B4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-4A0A075B6B4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-4A0A075B6B4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-4A0A075B6B4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.07■□□□□ 0.32
Trav6-4A0A075B6B4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-4A0A075B6B4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-4A0A075B6B4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-4A0A075B6B4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-4A0A075B6B4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav6-4A0A075B6B4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-4A0A075B6B4 Mir6538-201ENSMUST00000183713 110 ntBASIC17.06■□□□□ 0.32
Trav6-4A0A075B6B4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav6-4A0A075B6B4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
Trav6-4A0A075B6B4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav6-4A0A075B6B4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trav6-4A0A075B6B4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-4A0A075B6B4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-4A0A075B6B4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-4A0A075B6B4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-4A0A075B6B4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-4A0A075B6B4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-4A0A075B6B4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-4A0A075B6B4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.04■□□□□ 0.32
Trav6-4A0A075B6B4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.04■□□□□ 0.32
Trav6-4A0A075B6B4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav6-4A0A075B6B4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-4A0A075B6B4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-4A0A075B6B4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-4A0A075B6B4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-4A0A075B6B4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav6-4A0A075B6B4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav6-4A0A075B6B4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-4A0A075B6B4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav6-4A0A075B6B4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav6-4A0A075B6B4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav6-4A0A075B6B4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Trav6-4A0A075B6B4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-4A0A075B6B4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-4A0A075B6B4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-4A0A075B6B4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-4A0A075B6B4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6-4A0A075B6B4 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.02■□□□□ 0.32
Trav6-4A0A075B6B4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6-4A0A075B6B4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav6-4A0A075B6B4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6-4A0A075B6B4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6-4A0A075B6B4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trav6-4A0A075B6B4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-4A0A075B6B4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.01■□□□□ 0.31
Trav6-4A0A075B6B4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-4A0A075B6B4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-4A0A075B6B4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-4A0A075B6B4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-4A0A075B6B4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trav6-4A0A075B6B4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Trav6-4A0A075B6B4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms