Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-2A0A075B649 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-2A0A075B649 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav13-2A0A075B649 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13-2A0A075B649 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13-2A0A075B649 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13-2A0A075B649 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13-2A0A075B649 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13-2A0A075B649 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13-2A0A075B649 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav13-2A0A075B649 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13-2A0A075B649 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13-2A0A075B649 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13-2A0A075B649 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC14.92□□□□□ -0.02
Trav13-2A0A075B649 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13-2A0A075B649 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav13-2A0A075B649 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
Trav13-2A0A075B649 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13-2A0A075B649 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13-2A0A075B649 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13-2A0A075B649 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav13-2A0A075B649 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13-2A0A075B649 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Trav13-2A0A075B649 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-2A0A075B649 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-2A0A075B649 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-2A0A075B649 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-2A0A075B649 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-2A0A075B649 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-2A0A075B649 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-2A0A075B649 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav13-2A0A075B649 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13-2A0A075B649 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav13-2A0A075B649 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13-2A0A075B649 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav13-2A0A075B649 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13-2A0A075B649 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav13-2A0A075B649 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13-2A0A075B649 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Trav13-2A0A075B649 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13-2A0A075B649 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13-2A0A075B649 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13-2A0A075B649 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13-2A0A075B649 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav13-2A0A075B649 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13-2A0A075B649 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13-2A0A075B649 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13-2A0A075B649 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13-2A0A075B649 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13-2A0A075B649 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13-2A0A075B649 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav13-2A0A075B649 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13-2A0A075B649 Gm14121-201ENSMUST00000121441 1380 ntBASIC14.86□□□□□ -0.03
Trav13-2A0A075B649 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-2A0A075B649 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Trav13-2A0A075B649 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13-2A0A075B649 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav13-2A0A075B649 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13-2A0A075B649 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13-2A0A075B649 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13-2A0A075B649 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13-2A0A075B649 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13-2A0A075B649 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13-2A0A075B649 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13-2A0A075B649 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13-2A0A075B649 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trav13-2A0A075B649 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC14.84□□□□□ -0.03
Trav13-2A0A075B649 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13-2A0A075B649 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13-2A0A075B649 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13-2A0A075B649 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav13-2A0A075B649 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13-2A0A075B649 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav13-2A0A075B649 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav13-2A0A075B649 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Trav13-2A0A075B649 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav13-2A0A075B649 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13-2A0A075B649 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Trav13-2A0A075B649 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13-2A0A075B649 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13-2A0A075B649 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13-2A0A075B649 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13-2A0A075B649 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13-2A0A075B649 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13-2A0A075B649 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13-2A0A075B649 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-2A0A075B649 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-2A0A075B649 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav13-2A0A075B649 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-2A0A075B649 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-2A0A075B649 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-2A0A075B649 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13-2A0A075B649 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav13-2A0A075B649 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav13-2A0A075B649 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav13-2A0A075B649 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-2A0A075B649 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-2A0A075B649 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
Trav13-2A0A075B649 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13-2A0A075B649 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 167.1 ms