Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Raf1Q99N57 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Raf1Q99N57 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Raf1Q99N57 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Raf1Q99N57 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Raf1Q99N57 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Raf1Q99N57 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Raf1Q99N57 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.03■□□□□ 0.8
Raf1Q99N57 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Raf1Q99N57 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Raf1Q99N57 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Raf1Q99N57 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Raf1Q99N57 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Raf1Q99N57 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Raf1Q99N57 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Raf1Q99N57 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.02■□□□□ 0.8
Raf1Q99N57 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Raf1Q99N57 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Raf1Q99N57 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
Raf1Q99N57 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.02■□□□□ 0.79
Raf1Q99N57 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Raf1Q99N57 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.01■□□□□ 0.79
Raf1Q99N57 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Raf1Q99N57 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.01■□□□□ 0.79
Raf1Q99N57 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Raf1Q99N57 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Raf1Q99N57 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Raf1Q99N57 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Raf1Q99N57 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.99■□□□□ 0.79
Raf1Q99N57 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Raf1Q99N57 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Raf1Q99N57 Mir6538-201ENSMUST00000183713 110 ntBASIC19.99■□□□□ 0.79
Raf1Q99N57 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Raf1Q99N57 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Raf1Q99N57 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Raf1Q99N57 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Raf1Q99N57 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Raf1Q99N57 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Raf1Q99N57 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Raf1Q99N57 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Raf1Q99N57 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Raf1Q99N57 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
Raf1Q99N57 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Raf1Q99N57 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Raf1Q99N57 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Raf1Q99N57 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Raf1Q99N57 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Raf1Q99N57 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Raf1Q99N57 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Raf1Q99N57 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Raf1Q99N57 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Raf1Q99N57 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Raf1Q99N57 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Raf1Q99N57 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Raf1Q99N57 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Raf1Q99N57 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Raf1Q99N57 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Raf1Q99N57 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Raf1Q99N57 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Raf1Q99N57 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Raf1Q99N57 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.93■□□□□ 0.78
Raf1Q99N57 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Raf1Q99N57 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Raf1Q99N57 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Raf1Q99N57 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Raf1Q99N57 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Raf1Q99N57 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Raf1Q99N57 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Raf1Q99N57 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Raf1Q99N57 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.92■□□□□ 0.78
Raf1Q99N57 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Raf1Q99N57 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Raf1Q99N57 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Raf1Q99N57 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Raf1Q99N57 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.91■□□□□ 0.78
Raf1Q99N57 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Raf1Q99N57 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.91■□□□□ 0.78
Raf1Q99N57 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Raf1Q99N57 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Raf1Q99N57 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.9■□□□□ 0.78
Raf1Q99N57 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
Raf1Q99N57 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Raf1Q99N57 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Raf1Q99N57 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Raf1Q99N57 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Raf1Q99N57 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
Raf1Q99N57 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Raf1Q99N57 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Raf1Q99N57 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Raf1Q99N57 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Raf1Q99N57 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Raf1Q99N57 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Raf1Q99N57 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Raf1Q99N57 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Raf1Q99N57 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Raf1Q99N57 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Raf1Q99N57 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.88■□□□□ 0.77
Raf1Q99N57 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Raf1Q99N57 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Raf1Q99N57 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 153.5 ms