Protein–RNA interactions for Protein: Q8R4I4

Gtf2a1l, TFIIA-alpha and beta-like factor, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1lQ8R4I4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gtf2a1lQ8R4I4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gtf2a1lQ8R4I4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gtf2a1lQ8R4I4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Gtf2a1lQ8R4I4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gtf2a1lQ8R4I4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gtf2a1lQ8R4I4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Gtf2a1lQ8R4I4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Gtf2a1lQ8R4I4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gtf2a1lQ8R4I4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Gtf2a1lQ8R4I4 Gm4799-201ENSMUST00000095396 657 ntBASIC21.83■■□□□ 1.09
Gtf2a1lQ8R4I4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Gtf2a1lQ8R4I4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Gtf2a1lQ8R4I4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Gtf2a1lQ8R4I4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gtf2a1lQ8R4I4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gtf2a1lQ8R4I4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gtf2a1lQ8R4I4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gtf2a1lQ8R4I4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gtf2a1lQ8R4I4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.81■■□□□ 1.08
Gtf2a1lQ8R4I4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Gtf2a1lQ8R4I4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gtf2a1lQ8R4I4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Gtf2a1lQ8R4I4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gtf2a1lQ8R4I4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gtf2a1lQ8R4I4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.8■■□□□ 1.08
Gtf2a1lQ8R4I4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gtf2a1lQ8R4I4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gtf2a1lQ8R4I4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gtf2a1lQ8R4I4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gtf2a1lQ8R4I4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gtf2a1lQ8R4I4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.79■■□□□ 1.08
Gtf2a1lQ8R4I4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gtf2a1lQ8R4I4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
Gtf2a1lQ8R4I4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gtf2a1lQ8R4I4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gtf2a1lQ8R4I4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
Gtf2a1lQ8R4I4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gtf2a1lQ8R4I4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gtf2a1lQ8R4I4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gtf2a1lQ8R4I4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Gtf2a1lQ8R4I4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gtf2a1lQ8R4I4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Gtf2a1lQ8R4I4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Gtf2a1lQ8R4I4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Gtf2a1lQ8R4I4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gtf2a1lQ8R4I4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Gtf2a1lQ8R4I4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.76■■□□□ 1.07
Gtf2a1lQ8R4I4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Gtf2a1lQ8R4I4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gtf2a1lQ8R4I4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.76■■□□□ 1.07
Gtf2a1lQ8R4I4 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.75■■□□□ 1.07
Gtf2a1lQ8R4I4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gtf2a1lQ8R4I4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gtf2a1lQ8R4I4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gtf2a1lQ8R4I4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gtf2a1lQ8R4I4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gtf2a1lQ8R4I4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gtf2a1lQ8R4I4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gtf2a1lQ8R4I4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gtf2a1lQ8R4I4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gtf2a1lQ8R4I4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Gtf2a1lQ8R4I4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Gtf2a1lQ8R4I4 Mir3960-201ENSMUST00000198213 73 ntBASIC21.73■■□□□ 1.07
Gtf2a1lQ8R4I4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gtf2a1lQ8R4I4 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.73■■□□□ 1.07
Gtf2a1lQ8R4I4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Gtf2a1lQ8R4I4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.72■■□□□ 1.07
Gtf2a1lQ8R4I4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Gtf2a1lQ8R4I4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gtf2a1lQ8R4I4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gtf2a1lQ8R4I4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.71■■□□□ 1.07
Gtf2a1lQ8R4I4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Gtf2a1lQ8R4I4 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.71■■□□□ 1.07
Gtf2a1lQ8R4I4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Gtf2a1lQ8R4I4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gtf2a1lQ8R4I4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gtf2a1lQ8R4I4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gtf2a1lQ8R4I4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gtf2a1lQ8R4I4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Gtf2a1lQ8R4I4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gtf2a1lQ8R4I4 Scarna2-201ENSMUST00000157560 414 ntBASIC21.69■■□□□ 1.06
Gtf2a1lQ8R4I4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gtf2a1lQ8R4I4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gtf2a1lQ8R4I4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gtf2a1lQ8R4I4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gtf2a1lQ8R4I4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gtf2a1lQ8R4I4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
Gtf2a1lQ8R4I4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Gtf2a1lQ8R4I4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gtf2a1lQ8R4I4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gtf2a1lQ8R4I4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.66■■□□□ 1.06
Gtf2a1lQ8R4I4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gtf2a1lQ8R4I4 Cap2-205ENSMUST00000225824 1634 ntBASIC21.66■■□□□ 1.06
Gtf2a1lQ8R4I4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gtf2a1lQ8R4I4 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.66■■□□□ 1.06
Gtf2a1lQ8R4I4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Gtf2a1lQ8R4I4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Gtf2a1lQ8R4I4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.65■■□□□ 1.06
Gtf2a1lQ8R4I4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms