Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cystm1Q8K353 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cystm1Q8K353 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cystm1Q8K353 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cystm1Q8K353 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cystm1Q8K353 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cystm1Q8K353 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cystm1Q8K353 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cystm1Q8K353 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cystm1Q8K353 AC157572.2-201ENSMUST00000226970 908 ntBASIC14.05□□□□□ -0.16
Cystm1Q8K353 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cystm1Q8K353 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cystm1Q8K353 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cystm1Q8K353 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cystm1Q8K353 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cystm1Q8K353 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC14.04□□□□□ -0.16
Cystm1Q8K353 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cystm1Q8K353 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cystm1Q8K353 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cystm1Q8K353 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cystm1Q8K353 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cystm1Q8K353 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cystm1Q8K353 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cystm1Q8K353 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cystm1Q8K353 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cystm1Q8K353 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cystm1Q8K353 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cystm1Q8K353 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cystm1Q8K353 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cystm1Q8K353 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cystm1Q8K353 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cystm1Q8K353 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cystm1Q8K353 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
Cystm1Q8K353 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cystm1Q8K353 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cystm1Q8K353 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC14.02□□□□□ -0.17
Cystm1Q8K353 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.02□□□□□ -0.17
Cystm1Q8K353 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cystm1Q8K353 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cystm1Q8K353 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cystm1Q8K353 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cystm1Q8K353 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cystm1Q8K353 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cystm1Q8K353 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.01□□□□□ -0.17
Cystm1Q8K353 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cystm1Q8K353 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Cystm1Q8K353 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC14□□□□□ -0.17
Cystm1Q8K353 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cystm1Q8K353 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cystm1Q8K353 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cystm1Q8K353 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cystm1Q8K353 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cystm1Q8K353 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cystm1Q8K353 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cystm1Q8K353 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cystm1Q8K353 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cystm1Q8K353 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cystm1Q8K353 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cystm1Q8K353 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cystm1Q8K353 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Cystm1Q8K353 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cystm1Q8K353 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cystm1Q8K353 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Cystm1Q8K353 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cystm1Q8K353 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cystm1Q8K353 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cystm1Q8K353 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cystm1Q8K353 Gm32051-202ENSMUST00000197905 2385 ntBASIC13.98□□□□□ -0.17
Cystm1Q8K353 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC13.98□□□□□ -0.17
Cystm1Q8K353 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cystm1Q8K353 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cystm1Q8K353 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cystm1Q8K353 Gm6934-201ENSMUST00000194780 1905 ntBASIC13.98□□□□□ -0.17
Cystm1Q8K353 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cystm1Q8K353 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cystm1Q8K353 Gm8503-201ENSMUST00000118131 455 ntBASIC13.97□□□□□ -0.17
Cystm1Q8K353 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cystm1Q8K353 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cystm1Q8K353 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cystm1Q8K353 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cystm1Q8K353 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cystm1Q8K353 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cystm1Q8K353 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cystm1Q8K353 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cystm1Q8K353 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cystm1Q8K353 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Cystm1Q8K353 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cystm1Q8K353 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cystm1Q8K353 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cystm1Q8K353 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cystm1Q8K353 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cystm1Q8K353 Gm9939-201ENSMUST00000067161 1154 ntBASIC13.95□□□□□ -0.18
Cystm1Q8K353 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cystm1Q8K353 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cystm1Q8K353 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cystm1Q8K353 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cystm1Q8K353 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Cystm1Q8K353 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cystm1Q8K353 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cystm1Q8K353 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms