Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rtn4rl1Q8K0S5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rtn4rl1Q8K0S5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rtn4rl1Q8K0S5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.3■■□□□ 1.32
Rtn4rl1Q8K0S5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.3■■□□□ 1.32
Rtn4rl1Q8K0S5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rtn4rl1Q8K0S5 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rtn4rl1Q8K0S5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.29■■□□□ 1.32
Rtn4rl1Q8K0S5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rtn4rl1Q8K0S5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.29■■□□□ 1.32
Rtn4rl1Q8K0S5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rtn4rl1Q8K0S5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rtn4rl1Q8K0S5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Rtn4rl1Q8K0S5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rtn4rl1Q8K0S5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.28■■□□□ 1.32
Rtn4rl1Q8K0S5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rtn4rl1Q8K0S5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rtn4rl1Q8K0S5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.27■■□□□ 1.32
Rtn4rl1Q8K0S5 Gm45444-201ENSMUST00000211394 898 ntBASIC23.26■■□□□ 1.31
Rtn4rl1Q8K0S5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rtn4rl1Q8K0S5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Rtn4rl1Q8K0S5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rtn4rl1Q8K0S5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rtn4rl1Q8K0S5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.25■■□□□ 1.31
Rtn4rl1Q8K0S5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rtn4rl1Q8K0S5 Gm15820-201ENSMUST00000201566 728 ntBASIC23.24■■□□□ 1.31
Rtn4rl1Q8K0S5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Rtn4rl1Q8K0S5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rtn4rl1Q8K0S5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.23■■□□□ 1.31
Rtn4rl1Q8K0S5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rtn4rl1Q8K0S5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rtn4rl1Q8K0S5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rtn4rl1Q8K0S5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rtn4rl1Q8K0S5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rtn4rl1Q8K0S5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Rtn4rl1Q8K0S5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rtn4rl1Q8K0S5 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rtn4rl1Q8K0S5 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rtn4rl1Q8K0S5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rtn4rl1Q8K0S5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rtn4rl1Q8K0S5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rtn4rl1Q8K0S5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rtn4rl1Q8K0S5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.19■■□□□ 1.3
Rtn4rl1Q8K0S5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rtn4rl1Q8K0S5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rtn4rl1Q8K0S5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rtn4rl1Q8K0S5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.18■■□□□ 1.3
Rtn4rl1Q8K0S5 Rps24-207ENSMUST00000224568 714 ntBASIC23.18■■□□□ 1.3
Rtn4rl1Q8K0S5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rtn4rl1Q8K0S5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rtn4rl1Q8K0S5 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.17■■□□□ 1.3
Rtn4rl1Q8K0S5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rtn4rl1Q8K0S5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rtn4rl1Q8K0S5 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rtn4rl1Q8K0S5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.17■■□□□ 1.3
Rtn4rl1Q8K0S5 Gm45102-201ENSMUST00000207427 857 ntBASIC23.17■■□□□ 1.3
Rtn4rl1Q8K0S5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rtn4rl1Q8K0S5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rtn4rl1Q8K0S5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Rtn4rl1Q8K0S5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.16■■□□□ 1.3
Rtn4rl1Q8K0S5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.16■■□□□ 1.3
Rtn4rl1Q8K0S5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rtn4rl1Q8K0S5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rtn4rl1Q8K0S5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rtn4rl1Q8K0S5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Rtn4rl1Q8K0S5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Rtn4rl1Q8K0S5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Rtn4rl1Q8K0S5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rtn4rl1Q8K0S5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rtn4rl1Q8K0S5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.14■■□□□ 1.29
Rtn4rl1Q8K0S5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.14■■□□□ 1.29
Rtn4rl1Q8K0S5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rtn4rl1Q8K0S5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rtn4rl1Q8K0S5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rtn4rl1Q8K0S5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn4rl1Q8K0S5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn4rl1Q8K0S5 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Rtn4rl1Q8K0S5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn4rl1Q8K0S5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Rtn4rl1Q8K0S5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn4rl1Q8K0S5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Rtn4rl1Q8K0S5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.12■■□□□ 1.29
Rtn4rl1Q8K0S5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn4rl1Q8K0S5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn4rl1Q8K0S5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4rl1Q8K0S5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.11■■□□□ 1.29
Rtn4rl1Q8K0S5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Rtn4rl1Q8K0S5 Gm14117-201ENSMUST00000122417 843 ntBASIC23.11■■□□□ 1.29
Rtn4rl1Q8K0S5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Rtn4rl1Q8K0S5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Rtn4rl1Q8K0S5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Rtn4rl1Q8K0S5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4rl1Q8K0S5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4rl1Q8K0S5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4rl1Q8K0S5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rtn4rl1Q8K0S5 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtn4rl1Q8K0S5 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rtn4rl1Q8K0S5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
Rtn4rl1Q8K0S5 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rtn4rl1Q8K0S5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms