Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Depdc1aQ8CIG0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Depdc1aQ8CIG0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Depdc1aQ8CIG0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Depdc1aQ8CIG0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Depdc1aQ8CIG0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
Depdc1aQ8CIG0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Depdc1aQ8CIG0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.76■■□□□ 1.71
Depdc1aQ8CIG0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
Depdc1aQ8CIG0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Depdc1aQ8CIG0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Depdc1aQ8CIG0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Depdc1aQ8CIG0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Depdc1aQ8CIG0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.76■■□□□ 1.71
Depdc1aQ8CIG0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Depdc1aQ8CIG0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Depdc1aQ8CIG0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Depdc1aQ8CIG0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Depdc1aQ8CIG0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Depdc1aQ8CIG0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.73■■□□□ 1.71
Depdc1aQ8CIG0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Depdc1aQ8CIG0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Depdc1aQ8CIG0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Depdc1aQ8CIG0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
Depdc1aQ8CIG0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Depdc1aQ8CIG0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Depdc1aQ8CIG0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC25.71■■□□□ 1.71
Depdc1aQ8CIG0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
Depdc1aQ8CIG0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.71■■□□□ 1.71
Depdc1aQ8CIG0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Depdc1aQ8CIG0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC25.7■■□□□ 1.7
Depdc1aQ8CIG0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Depdc1aQ8CIG0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Depdc1aQ8CIG0 Gm10420-201ENSMUST00000121713 882 ntBASIC25.7■■□□□ 1.7
Depdc1aQ8CIG0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Depdc1aQ8CIG0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Depdc1aQ8CIG0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC25.7■■□□□ 1.7
Depdc1aQ8CIG0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Depdc1aQ8CIG0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Depdc1aQ8CIG0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Depdc1aQ8CIG0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.68■■□□□ 1.7
Depdc1aQ8CIG0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Depdc1aQ8CIG0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Depdc1aQ8CIG0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC25.67■■□□□ 1.7
Depdc1aQ8CIG0 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.67■■□□□ 1.7
Depdc1aQ8CIG0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Depdc1aQ8CIG0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Depdc1aQ8CIG0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
Depdc1aQ8CIG0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Depdc1aQ8CIG0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC25.66■■□□□ 1.7
Depdc1aQ8CIG0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Depdc1aQ8CIG0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Depdc1aQ8CIG0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Depdc1aQ8CIG0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Depdc1aQ8CIG0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Depdc1aQ8CIG0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Depdc1aQ8CIG0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
Depdc1aQ8CIG0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Depdc1aQ8CIG0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Depdc1aQ8CIG0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Depdc1aQ8CIG0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Depdc1aQ8CIG0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Depdc1aQ8CIG0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC25.63■■□□□ 1.69
Depdc1aQ8CIG0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Depdc1aQ8CIG0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Depdc1aQ8CIG0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Depdc1aQ8CIG0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Depdc1aQ8CIG0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC25.6■■□□□ 1.69
Depdc1aQ8CIG0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Depdc1aQ8CIG0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Depdc1aQ8CIG0 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.58■■□□□ 1.69
Depdc1aQ8CIG0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Depdc1aQ8CIG0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.58■■□□□ 1.68
Depdc1aQ8CIG0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Depdc1aQ8CIG0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC25.57■■□□□ 1.68
Depdc1aQ8CIG0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Depdc1aQ8CIG0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Depdc1aQ8CIG0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Depdc1aQ8CIG0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Depdc1aQ8CIG0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Depdc1aQ8CIG0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
Depdc1aQ8CIG0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Depdc1aQ8CIG0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Depdc1aQ8CIG0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Depdc1aQ8CIG0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.54■■□□□ 1.68
Depdc1aQ8CIG0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Depdc1aQ8CIG0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Depdc1aQ8CIG0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC25.53■■□□□ 1.68
Depdc1aQ8CIG0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.53■■□□□ 1.68
Depdc1aQ8CIG0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Depdc1aQ8CIG0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Depdc1aQ8CIG0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Depdc1aQ8CIG0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Depdc1aQ8CIG0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Depdc1aQ8CIG0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Depdc1aQ8CIG0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
Depdc1aQ8CIG0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Depdc1aQ8CIG0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Depdc1aQ8CIG0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Depdc1aQ8CIG0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms