Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.62■■□□□ 1.85
Rbm28Q8CGC6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.61■■□□□ 1.85
Rbm28Q8CGC6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26.61■■□□□ 1.85
Rbm28Q8CGC6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Rbm28Q8CGC6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rbm28Q8CGC6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rbm28Q8CGC6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rbm28Q8CGC6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rbm28Q8CGC6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rbm28Q8CGC6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rbm28Q8CGC6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Rbm28Q8CGC6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.57■■□□□ 1.84
Rbm28Q8CGC6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Rbm28Q8CGC6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Rbm28Q8CGC6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Rbm28Q8CGC6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Rbm28Q8CGC6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Rbm28Q8CGC6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Rbm28Q8CGC6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
Rbm28Q8CGC6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.56■■□□□ 1.84
Rbm28Q8CGC6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.55■■□□□ 1.84
Rbm28Q8CGC6 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.55■■□□□ 1.84
Rbm28Q8CGC6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.55■■□□□ 1.84
Rbm28Q8CGC6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rbm28Q8CGC6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rbm28Q8CGC6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Rbm28Q8CGC6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Rbm28Q8CGC6 Gm10420-201ENSMUST00000121713 882 ntBASIC26.53■■□□□ 1.84
Rbm28Q8CGC6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rbm28Q8CGC6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Rbm28Q8CGC6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC26.53■■□□□ 1.84
Rbm28Q8CGC6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rbm28Q8CGC6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Rbm28Q8CGC6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Rbm28Q8CGC6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.84
Rbm28Q8CGC6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
Rbm28Q8CGC6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Rbm28Q8CGC6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
Rbm28Q8CGC6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Rbm28Q8CGC6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Rbm28Q8CGC6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Rbm28Q8CGC6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Rbm28Q8CGC6 Gm44428-201ENSMUST00000204474 874 ntBASIC26.49■■□□□ 1.83
Rbm28Q8CGC6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Rbm28Q8CGC6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Rbm28Q8CGC6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Rbm28Q8CGC6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Rbm28Q8CGC6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Rbm28Q8CGC6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rbm28Q8CGC6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rbm28Q8CGC6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC26.46■■□□□ 1.83
Rbm28Q8CGC6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rbm28Q8CGC6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Rbm28Q8CGC6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Rbm28Q8CGC6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Rbm28Q8CGC6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Rbm28Q8CGC6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Rbm28Q8CGC6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rbm28Q8CGC6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rbm28Q8CGC6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC26.44■■□□□ 1.82
Rbm28Q8CGC6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.44■■□□□ 1.82
Rbm28Q8CGC6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Rbm28Q8CGC6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.44■■□□□ 1.82
Rbm28Q8CGC6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Rbm28Q8CGC6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Rbm28Q8CGC6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rbm28Q8CGC6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.43■■□□□ 1.82
Rbm28Q8CGC6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rbm28Q8CGC6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rbm28Q8CGC6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rbm28Q8CGC6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Rbm28Q8CGC6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rbm28Q8CGC6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rbm28Q8CGC6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
Rbm28Q8CGC6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.38■■□□□ 1.81
Rbm28Q8CGC6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Rbm28Q8CGC6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rbm28Q8CGC6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rbm28Q8CGC6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rbm28Q8CGC6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rbm28Q8CGC6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rbm28Q8CGC6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Rbm28Q8CGC6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Rbm28Q8CGC6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC26.37■■□□□ 1.81
Rbm28Q8CGC6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rbm28Q8CGC6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Rbm28Q8CGC6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Rbm28Q8CGC6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rbm28Q8CGC6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Rbm28Q8CGC6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rbm28Q8CGC6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Rbm28Q8CGC6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26.36■■□□□ 1.81
Rbm28Q8CGC6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rbm28Q8CGC6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rbm28Q8CGC6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Rbm28Q8CGC6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Rbm28Q8CGC6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.35■■□□□ 1.81
Rbm28Q8CGC6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Rbm28Q8CGC6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Rbm28Q8CGC6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms