Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Pcdhb7Q8CDY9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Pcdhb7Q8CDY9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Pcdhb7Q8CDY9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.42■■□□□ 1.18
Pcdhb7Q8CDY9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.42■■□□□ 1.18
Pcdhb7Q8CDY9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb7Q8CDY9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Pcdhb7Q8CDY9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.39■■□□□ 1.18
Pcdhb7Q8CDY9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhb7Q8CDY9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Pcdhb7Q8CDY9 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.38■■□□□ 1.17
Pcdhb7Q8CDY9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb7Q8CDY9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.38■■□□□ 1.17
Pcdhb7Q8CDY9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb7Q8CDY9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb7Q8CDY9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb7Q8CDY9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.37■■□□□ 1.17
Pcdhb7Q8CDY9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb7Q8CDY9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Pcdhb7Q8CDY9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb7Q8CDY9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Pcdhb7Q8CDY9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Pcdhb7Q8CDY9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Pcdhb7Q8CDY9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.36■■□□□ 1.17
Pcdhb7Q8CDY9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.36■■□□□ 1.17
Pcdhb7Q8CDY9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Pcdhb7Q8CDY9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Pcdhb7Q8CDY9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb7Q8CDY9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb7Q8CDY9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb7Q8CDY9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb7Q8CDY9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb7Q8CDY9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Pcdhb7Q8CDY9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb7Q8CDY9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb7Q8CDY9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb7Q8CDY9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb7Q8CDY9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb7Q8CDY9 Mir3960-201ENSMUST00000198213 73 ntBASIC22.33■■□□□ 1.17
Pcdhb7Q8CDY9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb7Q8CDY9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb7Q8CDY9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.32■■□□□ 1.16
Pcdhb7Q8CDY9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb7Q8CDY9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Pcdhb7Q8CDY9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb7Q8CDY9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhb7Q8CDY9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb7Q8CDY9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhb7Q8CDY9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb7Q8CDY9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb7Q8CDY9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhb7Q8CDY9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb7Q8CDY9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhb7Q8CDY9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhb7Q8CDY9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcdhb7Q8CDY9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Pcdhb7Q8CDY9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb7Q8CDY9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Pcdhb7Q8CDY9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.3■■□□□ 1.16
Pcdhb7Q8CDY9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb7Q8CDY9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb7Q8CDY9 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.29■■□□□ 1.16
Pcdhb7Q8CDY9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb7Q8CDY9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb7Q8CDY9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb7Q8CDY9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb7Q8CDY9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb7Q8CDY9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb7Q8CDY9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb7Q8CDY9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb7Q8CDY9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb7Q8CDY9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb7Q8CDY9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb7Q8CDY9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Pcdhb7Q8CDY9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb7Q8CDY9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb7Q8CDY9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb7Q8CDY9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.26■■□□□ 1.15
Pcdhb7Q8CDY9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.24■■□□□ 1.15
Pcdhb7Q8CDY9 Gm9812-201ENSMUST00000061934 968 ntBASIC22.24■■□□□ 1.15
Pcdhb7Q8CDY9 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.24■■□□□ 1.15
Pcdhb7Q8CDY9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb7Q8CDY9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb7Q8CDY9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb7Q8CDY9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Pcdhb7Q8CDY9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb7Q8CDY9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb7Q8CDY9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Pcdhb7Q8CDY9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms