Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gm9812-201ENSMUST00000061934 968 ntBASIC18.29■□□□□ 0.52
Chd9Q8BYH8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.28■□□□□ 0.52
Chd9Q8BYH8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd9Q8BYH8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Chd9Q8BYH8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd9Q8BYH8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd9Q8BYH8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd9Q8BYH8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chd9Q8BYH8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.27■□□□□ 0.51
Chd9Q8BYH8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd9Q8BYH8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd9Q8BYH8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.25■□□□□ 0.51
Chd9Q8BYH8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.25■□□□□ 0.51
Chd9Q8BYH8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chd9Q8BYH8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chd9Q8BYH8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Chd9Q8BYH8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chd9Q8BYH8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chd9Q8BYH8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chd9Q8BYH8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chd9Q8BYH8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chd9Q8BYH8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.24■□□□□ 0.51
Chd9Q8BYH8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chd9Q8BYH8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Chd9Q8BYH8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Chd9Q8BYH8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Chd9Q8BYH8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.23■□□□□ 0.51
Chd9Q8BYH8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.22■□□□□ 0.51
Chd9Q8BYH8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chd9Q8BYH8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chd9Q8BYH8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chd9Q8BYH8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chd9Q8BYH8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chd9Q8BYH8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chd9Q8BYH8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Chd9Q8BYH8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.21■□□□□ 0.51
Chd9Q8BYH8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Chd9Q8BYH8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd9Q8BYH8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Chd9Q8BYH8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chd9Q8BYH8 Gm9847-201ENSMUST00000052528 599 ntBASIC18.2■□□□□ 0.5
Chd9Q8BYH8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.2■□□□□ 0.5
Chd9Q8BYH8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Chd9Q8BYH8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.19■□□□□ 0.5
Chd9Q8BYH8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd9Q8BYH8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd9Q8BYH8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Chd9Q8BYH8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.18■□□□□ 0.5
Chd9Q8BYH8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd9Q8BYH8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Chd9Q8BYH8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd9Q8BYH8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chd9Q8BYH8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Chd9Q8BYH8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd9Q8BYH8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd9Q8BYH8 Gm18284-201ENSMUST00000172604 624 ntBASIC18.16■□□□□ 0.5
Chd9Q8BYH8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chd9Q8BYH8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd9Q8BYH8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.16■□□□□ 0.5
Chd9Q8BYH8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd9Q8BYH8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd9Q8BYH8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd9Q8BYH8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd9Q8BYH8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.15■□□□□ 0.5
Chd9Q8BYH8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.15■□□□□ 0.5
Chd9Q8BYH8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.15■□□□□ 0.5
Chd9Q8BYH8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd9Q8BYH8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chd9Q8BYH8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chd9Q8BYH8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd9Q8BYH8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.15■□□□□ 0.5
Chd9Q8BYH8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.14■□□□□ 0.5
Chd9Q8BYH8 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.14■□□□□ 0.49
Chd9Q8BYH8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd9Q8BYH8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd9Q8BYH8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd9Q8BYH8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd9Q8BYH8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd9Q8BYH8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Chd9Q8BYH8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chd9Q8BYH8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd9Q8BYH8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd9Q8BYH8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd9Q8BYH8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Chd9Q8BYH8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd9Q8BYH8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.12■□□□□ 0.49
Chd9Q8BYH8 Gm27011-201ENSMUST00000182352 972 ntBASIC18.12■□□□□ 0.49
Chd9Q8BYH8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
Chd9Q8BYH8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chd9Q8BYH8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chd9Q8BYH8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chd9Q8BYH8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chd9Q8BYH8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.11■□□□□ 0.49
Chd9Q8BYH8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Chd9Q8BYH8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd9Q8BYH8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chd9Q8BYH8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chd9Q8BYH8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chd9Q8BYH8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd9Q8BYH8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms