Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cpsf4Q8BQZ5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cpsf4Q8BQZ5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cpsf4Q8BQZ5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cpsf4Q8BQZ5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cpsf4Q8BQZ5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cpsf4Q8BQZ5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Cpsf4Q8BQZ5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cpsf4Q8BQZ5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cpsf4Q8BQZ5 Gm45364-201ENSMUST00000210883 159 ntBASIC21.64■■□□□ 1.05
Cpsf4Q8BQZ5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.64■■□□□ 1.05
Cpsf4Q8BQZ5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf4Q8BQZ5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf4Q8BQZ5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf4Q8BQZ5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf4Q8BQZ5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf4Q8BQZ5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf4Q8BQZ5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf4Q8BQZ5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf4Q8BQZ5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf4Q8BQZ5 Mir3960-201ENSMUST00000198213 73 ntBASIC21.62■■□□□ 1.05
Cpsf4Q8BQZ5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.62■■□□□ 1.05
Cpsf4Q8BQZ5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf4Q8BQZ5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.62■■□□□ 1.05
Cpsf4Q8BQZ5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf4Q8BQZ5 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.61■■□□□ 1.05
Cpsf4Q8BQZ5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf4Q8BQZ5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf4Q8BQZ5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Cpsf4Q8BQZ5 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.6■■□□□ 1.05
Cpsf4Q8BQZ5 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf4Q8BQZ5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Cpsf4Q8BQZ5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf4Q8BQZ5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf4Q8BQZ5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf4Q8BQZ5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf4Q8BQZ5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf4Q8BQZ5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf4Q8BQZ5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf4Q8BQZ5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf4Q8BQZ5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf4Q8BQZ5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cpsf4Q8BQZ5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cpsf4Q8BQZ5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cpsf4Q8BQZ5 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.57■■□□□ 1.04
Cpsf4Q8BQZ5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cpsf4Q8BQZ5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.57■■□□□ 1.04
Cpsf4Q8BQZ5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cpsf4Q8BQZ5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf4Q8BQZ5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.56■■□□□ 1.04
Cpsf4Q8BQZ5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf4Q8BQZ5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf4Q8BQZ5 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.55■■□□□ 1.04
Cpsf4Q8BQZ5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf4Q8BQZ5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf4Q8BQZ5 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.55■■□□□ 1.04
Cpsf4Q8BQZ5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf4Q8BQZ5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf4Q8BQZ5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf4Q8BQZ5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cpsf4Q8BQZ5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cpsf4Q8BQZ5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.54■■□□□ 1.04
Cpsf4Q8BQZ5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Cpsf4Q8BQZ5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cpsf4Q8BQZ5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf4Q8BQZ5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
Cpsf4Q8BQZ5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf4Q8BQZ5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf4Q8BQZ5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf4Q8BQZ5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf4Q8BQZ5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf4Q8BQZ5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf4Q8BQZ5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf4Q8BQZ5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf4Q8BQZ5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf4Q8BQZ5 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.52■■□□□ 1.03
Cpsf4Q8BQZ5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cpsf4Q8BQZ5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cpsf4Q8BQZ5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cpsf4Q8BQZ5 Scarna2-201ENSMUST00000157560 414 ntBASIC21.51■■□□□ 1.03
Cpsf4Q8BQZ5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.51■■□□□ 1.03
Cpsf4Q8BQZ5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Cpsf4Q8BQZ5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cpsf4Q8BQZ5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cpsf4Q8BQZ5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cpsf4Q8BQZ5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cpsf4Q8BQZ5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.5■■□□□ 1.03
Cpsf4Q8BQZ5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cpsf4Q8BQZ5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cpsf4Q8BQZ5 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cpsf4Q8BQZ5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cpsf4Q8BQZ5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cpsf4Q8BQZ5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.49■■□□□ 1.03
Cpsf4Q8BQZ5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.49■■□□□ 1.03
Cpsf4Q8BQZ5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cpsf4Q8BQZ5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Cpsf4Q8BQZ5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.48■■□□□ 1.03
Cpsf4Q8BQZ5 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.48■■□□□ 1.03
Cpsf4Q8BQZ5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cpsf4Q8BQZ5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms