Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Pcdh20Q8BIZ0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.78■■□□□ 1.08
Pcdh20Q8BIZ0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdh20Q8BIZ0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.77■■□□□ 1.08
Pcdh20Q8BIZ0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdh20Q8BIZ0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Pcdh20Q8BIZ0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Pcdh20Q8BIZ0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdh20Q8BIZ0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdh20Q8BIZ0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdh20Q8BIZ0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Pcdh20Q8BIZ0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh20Q8BIZ0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh20Q8BIZ0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh20Q8BIZ0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.75■■□□□ 1.07
Pcdh20Q8BIZ0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.75■■□□□ 1.07
Pcdh20Q8BIZ0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh20Q8BIZ0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh20Q8BIZ0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh20Q8BIZ0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh20Q8BIZ0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh20Q8BIZ0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Pcdh20Q8BIZ0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Pcdh20Q8BIZ0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pcdh20Q8BIZ0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh20Q8BIZ0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh20Q8BIZ0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh20Q8BIZ0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh20Q8BIZ0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Pcdh20Q8BIZ0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdh20Q8BIZ0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Pcdh20Q8BIZ0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdh20Q8BIZ0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh20Q8BIZ0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Pcdh20Q8BIZ0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcdh20Q8BIZ0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh20Q8BIZ0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh20Q8BIZ0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh20Q8BIZ0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh20Q8BIZ0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Pcdh20Q8BIZ0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh20Q8BIZ0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh20Q8BIZ0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh20Q8BIZ0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Pcdh20Q8BIZ0 Gm6311-201ENSMUST00000073790 878 ntBASIC21.7■■□□□ 1.06
Pcdh20Q8BIZ0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh20Q8BIZ0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh20Q8BIZ0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Pcdh20Q8BIZ0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh20Q8BIZ0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh20Q8BIZ0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Pcdh20Q8BIZ0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh20Q8BIZ0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Pcdh20Q8BIZ0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.69■■□□□ 1.06
Pcdh20Q8BIZ0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Pcdh20Q8BIZ0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh20Q8BIZ0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Pcdh20Q8BIZ0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Pcdh20Q8BIZ0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.68■■□□□ 1.06
Pcdh20Q8BIZ0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Pcdh20Q8BIZ0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdh20Q8BIZ0 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.68■■□□□ 1.06
Pcdh20Q8BIZ0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdh20Q8BIZ0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh20Q8BIZ0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh20Q8BIZ0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh20Q8BIZ0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh20Q8BIZ0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh20Q8BIZ0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdh20Q8BIZ0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdh20Q8BIZ0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.66■■□□□ 1.06
Pcdh20Q8BIZ0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Pcdh20Q8BIZ0 Gm4799-201ENSMUST00000095396 657 ntBASIC21.66■■□□□ 1.06
Pcdh20Q8BIZ0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh20Q8BIZ0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh20Q8BIZ0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdh20Q8BIZ0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh20Q8BIZ0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh20Q8BIZ0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh20Q8BIZ0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.65■■□□□ 1.06
Pcdh20Q8BIZ0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh20Q8BIZ0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Pcdh20Q8BIZ0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdh20Q8BIZ0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdh20Q8BIZ0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdh20Q8BIZ0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.64■■□□□ 1.06
Pcdh20Q8BIZ0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Pcdh20Q8BIZ0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdh20Q8BIZ0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh20Q8BIZ0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh20Q8BIZ0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.63■■□□□ 1.05
Pcdh20Q8BIZ0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh20Q8BIZ0 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.63■■□□□ 1.05
Pcdh20Q8BIZ0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh20Q8BIZ0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh20Q8BIZ0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh20Q8BIZ0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh20Q8BIZ0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh20Q8BIZ0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh20Q8BIZ0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms