Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC26.21■■□□□ 1.79
Samm50Q8BGH2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Samm50Q8BGH2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
Samm50Q8BGH2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Samm50Q8BGH2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Samm50Q8BGH2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Samm50Q8BGH2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Samm50Q8BGH2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Samm50Q8BGH2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC26.19■■□□□ 1.78
Samm50Q8BGH2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Samm50Q8BGH2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Samm50Q8BGH2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Samm50Q8BGH2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Samm50Q8BGH2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.18■■□□□ 1.78
Samm50Q8BGH2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Samm50Q8BGH2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Samm50Q8BGH2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Samm50Q8BGH2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Samm50Q8BGH2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Samm50Q8BGH2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Samm50Q8BGH2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.17■■□□□ 1.78
Samm50Q8BGH2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Samm50Q8BGH2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Samm50Q8BGH2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Samm50Q8BGH2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Samm50Q8BGH2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Samm50Q8BGH2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Samm50Q8BGH2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Samm50Q8BGH2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
Samm50Q8BGH2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
Samm50Q8BGH2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Samm50Q8BGH2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
Samm50Q8BGH2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
Samm50Q8BGH2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.14■■□□□ 1.78
Samm50Q8BGH2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.14■■□□□ 1.78
Samm50Q8BGH2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Samm50Q8BGH2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Samm50Q8BGH2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Samm50Q8BGH2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
Samm50Q8BGH2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Samm50Q8BGH2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Samm50Q8BGH2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Samm50Q8BGH2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Samm50Q8BGH2 Gm14121-201ENSMUST00000121441 1380 ntBASIC26.13■■□□□ 1.77
Samm50Q8BGH2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Samm50Q8BGH2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Samm50Q8BGH2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Samm50Q8BGH2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Samm50Q8BGH2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
Samm50Q8BGH2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.12■■□□□ 1.77
Samm50Q8BGH2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
Samm50Q8BGH2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC26.12■■□□□ 1.77
Samm50Q8BGH2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC26.12■■□□□ 1.77
Samm50Q8BGH2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Samm50Q8BGH2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC26.11■■□□□ 1.77
Samm50Q8BGH2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Samm50Q8BGH2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Samm50Q8BGH2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Samm50Q8BGH2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Samm50Q8BGH2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Samm50Q8BGH2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC26.1■■□□□ 1.77
Samm50Q8BGH2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Samm50Q8BGH2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Samm50Q8BGH2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC26.09■■□□□ 1.77
Samm50Q8BGH2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Samm50Q8BGH2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Samm50Q8BGH2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Samm50Q8BGH2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
Samm50Q8BGH2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Samm50Q8BGH2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Samm50Q8BGH2 Mir3960-201ENSMUST00000198213 73 ntBASIC26.07■■□□□ 1.76
Samm50Q8BGH2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Samm50Q8BGH2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Samm50Q8BGH2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Samm50Q8BGH2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Samm50Q8BGH2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
Samm50Q8BGH2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.06■■□□□ 1.76
Samm50Q8BGH2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Samm50Q8BGH2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC26.06■■□□□ 1.76
Samm50Q8BGH2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Samm50Q8BGH2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Samm50Q8BGH2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Samm50Q8BGH2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Samm50Q8BGH2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Samm50Q8BGH2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26.04■■□□□ 1.76
Samm50Q8BGH2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Samm50Q8BGH2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Samm50Q8BGH2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
Samm50Q8BGH2 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.04■■□□□ 1.76
Samm50Q8BGH2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Samm50Q8BGH2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Samm50Q8BGH2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.04■■□□□ 1.76
Samm50Q8BGH2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Samm50Q8BGH2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Samm50Q8BGH2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Samm50Q8BGH2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Samm50Q8BGH2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Samm50Q8BGH2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Samm50Q8BGH2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC26.02■■□□□ 1.76
Samm50Q8BGH2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.02■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms