Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Usp6nlQ80XC3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.15■■□□□ 1.62
Usp6nlQ80XC3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC25.15■■□□□ 1.62
Usp6nlQ80XC3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC25.15■■□□□ 1.62
Usp6nlQ80XC3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Usp6nlQ80XC3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.14■■□□□ 1.62
Usp6nlQ80XC3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Usp6nlQ80XC3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
Usp6nlQ80XC3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.13■■□□□ 1.61
Usp6nlQ80XC3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Usp6nlQ80XC3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
Usp6nlQ80XC3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Usp6nlQ80XC3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC25.13■■□□□ 1.61
Usp6nlQ80XC3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC25.13■■□□□ 1.61
Usp6nlQ80XC3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC25.13■■□□□ 1.61
Usp6nlQ80XC3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Usp6nlQ80XC3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Usp6nlQ80XC3 Gm45444-201ENSMUST00000211394 898 ntBASIC25.12■■□□□ 1.61
Usp6nlQ80XC3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC25.12■■□□□ 1.61
Usp6nlQ80XC3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Usp6nlQ80XC3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.11■■□□□ 1.61
Usp6nlQ80XC3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Usp6nlQ80XC3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Usp6nlQ80XC3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Usp6nlQ80XC3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Usp6nlQ80XC3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
Usp6nlQ80XC3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Usp6nlQ80XC3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC25.09■■□□□ 1.61
Usp6nlQ80XC3 AC093043.1-201ENSMUST00000226700 898 ntBASIC25.09■■□□□ 1.61
Usp6nlQ80XC3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Usp6nlQ80XC3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Usp6nlQ80XC3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Usp6nlQ80XC3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Usp6nlQ80XC3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
Usp6nlQ80XC3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Usp6nlQ80XC3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Usp6nlQ80XC3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Usp6nlQ80XC3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.08■■□□□ 1.61
Usp6nlQ80XC3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Usp6nlQ80XC3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Usp6nlQ80XC3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Usp6nlQ80XC3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Usp6nlQ80XC3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Usp6nlQ80XC3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Usp6nlQ80XC3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Usp6nlQ80XC3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Usp6nlQ80XC3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Usp6nlQ80XC3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Usp6nlQ80XC3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Usp6nlQ80XC3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Usp6nlQ80XC3 Gm15039-201ENSMUST00000118914 875 ntBASIC25.03■■□□□ 1.6
Usp6nlQ80XC3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC25.02■■□□□ 1.6
Usp6nlQ80XC3 Gm15820-201ENSMUST00000201566 728 ntBASIC25.02■■□□□ 1.6
Usp6nlQ80XC3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Usp6nlQ80XC3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC25.01■■□□□ 1.59
Usp6nlQ80XC3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Usp6nlQ80XC3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Usp6nlQ80XC3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Usp6nlQ80XC3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25■■□□□ 1.59
Usp6nlQ80XC3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Usp6nlQ80XC3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Usp6nlQ80XC3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Usp6nlQ80XC3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC25■■□□□ 1.59
Usp6nlQ80XC3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Usp6nlQ80XC3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Usp6nlQ80XC3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC24.99■■□□□ 1.59
Usp6nlQ80XC3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Usp6nlQ80XC3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Usp6nlQ80XC3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Usp6nlQ80XC3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Usp6nlQ80XC3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC24.98■■□□□ 1.59
Usp6nlQ80XC3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
Usp6nlQ80XC3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC24.98■■□□□ 1.59
Usp6nlQ80XC3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC24.98■■□□□ 1.59
Usp6nlQ80XC3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Usp6nlQ80XC3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Usp6nlQ80XC3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Usp6nlQ80XC3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Usp6nlQ80XC3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Usp6nlQ80XC3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Usp6nlQ80XC3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC24.97■■□□□ 1.59
Usp6nlQ80XC3 Rps24-207ENSMUST00000224568 714 ntBASIC24.97■■□□□ 1.59
Usp6nlQ80XC3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Usp6nlQ80XC3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Usp6nlQ80XC3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Usp6nlQ80XC3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Usp6nlQ80XC3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Usp6nlQ80XC3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Usp6nlQ80XC3 Gm45102-201ENSMUST00000207427 857 ntBASIC24.95■■□□□ 1.58
Usp6nlQ80XC3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Usp6nlQ80XC3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Usp6nlQ80XC3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.95■■□□□ 1.58
Usp6nlQ80XC3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC24.95■■□□□ 1.58
Usp6nlQ80XC3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Usp6nlQ80XC3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
Usp6nlQ80XC3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Usp6nlQ80XC3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC24.94■■□□□ 1.58
Usp6nlQ80XC3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
Usp6nlQ80XC3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Usp6nlQ80XC3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms