Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vrk1Q80X41 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Vrk1Q80X41 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
Vrk1Q80X41 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vrk1Q80X41 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Vrk1Q80X41 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vrk1Q80X41 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vrk1Q80X41 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Vrk1Q80X41 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Vrk1Q80X41 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vrk1Q80X41 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.5■■□□□ 1.03
Vrk1Q80X41 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vrk1Q80X41 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Vrk1Q80X41 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Vrk1Q80X41 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vrk1Q80X41 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vrk1Q80X41 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vrk1Q80X41 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vrk1Q80X41 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.47■■□□□ 1.03
Vrk1Q80X41 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
Vrk1Q80X41 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vrk1Q80X41 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Vrk1Q80X41 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.46■■□□□ 1.03
Vrk1Q80X41 Gm15546-201ENSMUST00000122095 826 ntBASIC21.46■■□□□ 1.03
Vrk1Q80X41 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.46■■□□□ 1.03
Vrk1Q80X41 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Vrk1Q80X41 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Vrk1Q80X41 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vrk1Q80X41 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.45■■□□□ 1.02
Vrk1Q80X41 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Vrk1Q80X41 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vrk1Q80X41 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vrk1Q80X41 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vrk1Q80X41 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.44■■□□□ 1.02
Vrk1Q80X41 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vrk1Q80X41 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vrk1Q80X41 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Vrk1Q80X41 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.44■■□□□ 1.02
Vrk1Q80X41 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vrk1Q80X41 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Vrk1Q80X41 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vrk1Q80X41 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vrk1Q80X41 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.43■■□□□ 1.02
Vrk1Q80X41 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Vrk1Q80X41 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Vrk1Q80X41 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vrk1Q80X41 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.42■■□□□ 1.02
Vrk1Q80X41 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vrk1Q80X41 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Vrk1Q80X41 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.41■■□□□ 1.02
Vrk1Q80X41 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vrk1Q80X41 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Vrk1Q80X41 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vrk1Q80X41 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Vrk1Q80X41 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Vrk1Q80X41 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vrk1Q80X41 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vrk1Q80X41 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vrk1Q80X41 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vrk1Q80X41 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Vrk1Q80X41 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.39■■□□□ 1.01
Vrk1Q80X41 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vrk1Q80X41 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vrk1Q80X41 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Vrk1Q80X41 Gm22567-201ENSMUST00000175542 342 ntBASIC21.38■■□□□ 1.01
Vrk1Q80X41 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.38■■□□□ 1.01
Vrk1Q80X41 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vrk1Q80X41 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vrk1Q80X41 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Vrk1Q80X41 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vrk1Q80X41 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vrk1Q80X41 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vrk1Q80X41 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vrk1Q80X41 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.36■■□□□ 1.01
Vrk1Q80X41 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vrk1Q80X41 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vrk1Q80X41 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.36■■□□□ 1.01
Vrk1Q80X41 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Vrk1Q80X41 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vrk1Q80X41 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Vrk1Q80X41 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vrk1Q80X41 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vrk1Q80X41 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vrk1Q80X41 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.34■■□□□ 1.01
Vrk1Q80X41 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.34■■□□□ 1.01
Vrk1Q80X41 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.34■■□□□ 1.01
Vrk1Q80X41 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Vrk1Q80X41 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vrk1Q80X41 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.33■■□□□ 1.01
Vrk1Q80X41 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.33■■□□□ 1.01
Vrk1Q80X41 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vrk1Q80X41 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.33■■□□□ 1
Vrk1Q80X41 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Vrk1Q80X41 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vrk1Q80X41 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Vrk1Q80X41 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vrk1Q80X41 Gm13238-201ENSMUST00000117655 780 ntBASIC21.32■■□□□ 1
Vrk1Q80X41 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Vrk1Q80X41 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vrk1Q80X41 Gm43566-201ENSMUST00000196851 808 ntBASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms