Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trappc6aQ78XR0 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.49■■□□□ 1.19
Trappc6aQ78XR0 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.49■■□□□ 1.19
Trappc6aQ78XR0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trappc6aQ78XR0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Trappc6aQ78XR0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.48■■□□□ 1.19
Trappc6aQ78XR0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Trappc6aQ78XR0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.48■■□□□ 1.19
Trappc6aQ78XR0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.48■■□□□ 1.19
Trappc6aQ78XR0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trappc6aQ78XR0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trappc6aQ78XR0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trappc6aQ78XR0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.48■■□□□ 1.19
Trappc6aQ78XR0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trappc6aQ78XR0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trappc6aQ78XR0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.47■■□□□ 1.19
Trappc6aQ78XR0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
Trappc6aQ78XR0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.46■■□□□ 1.19
Trappc6aQ78XR0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trappc6aQ78XR0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Trappc6aQ78XR0 Gm13238-201ENSMUST00000117655 780 ntBASIC22.44■■□□□ 1.18
Trappc6aQ78XR0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.43■■□□□ 1.18
Trappc6aQ78XR0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.43■■□□□ 1.18
Trappc6aQ78XR0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.43■■□□□ 1.18
Trappc6aQ78XR0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.43■■□□□ 1.18
Trappc6aQ78XR0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.43■■□□□ 1.18
Trappc6aQ78XR0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trappc6aQ78XR0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.43■■□□□ 1.18
Trappc6aQ78XR0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trappc6aQ78XR0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trappc6aQ78XR0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trappc6aQ78XR0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trappc6aQ78XR0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Trappc6aQ78XR0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
Trappc6aQ78XR0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trappc6aQ78XR0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.41■■□□□ 1.18
Trappc6aQ78XR0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trappc6aQ78XR0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trappc6aQ78XR0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Trappc6aQ78XR0 Gm43566-201ENSMUST00000196851 808 ntBASIC22.4■■□□□ 1.18
Trappc6aQ78XR0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trappc6aQ78XR0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trappc6aQ78XR0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
Trappc6aQ78XR0 Rps24-207ENSMUST00000224568 714 ntBASIC22.39■■□□□ 1.17
Trappc6aQ78XR0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trappc6aQ78XR0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trappc6aQ78XR0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trappc6aQ78XR0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.38■■□□□ 1.17
Trappc6aQ78XR0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trappc6aQ78XR0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trappc6aQ78XR0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trappc6aQ78XR0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trappc6aQ78XR0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.37■■□□□ 1.17
Trappc6aQ78XR0 Gm45444-201ENSMUST00000211394 898 ntBASIC22.37■■□□□ 1.17
Trappc6aQ78XR0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Trappc6aQ78XR0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.37■■□□□ 1.17
Trappc6aQ78XR0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trappc6aQ78XR0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trappc6aQ78XR0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trappc6aQ78XR0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trappc6aQ78XR0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trappc6aQ78XR0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trappc6aQ78XR0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trappc6aQ78XR0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trappc6aQ78XR0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Trappc6aQ78XR0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Trappc6aQ78XR0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.33■■□□□ 1.17
Trappc6aQ78XR0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.33■■□□□ 1.17
Trappc6aQ78XR0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trappc6aQ78XR0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Trappc6aQ78XR0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Trappc6aQ78XR0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Trappc6aQ78XR0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.32■■□□□ 1.16
Trappc6aQ78XR0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trappc6aQ78XR0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trappc6aQ78XR0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Trappc6aQ78XR0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trappc6aQ78XR0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trappc6aQ78XR0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.31■■□□□ 1.16
Trappc6aQ78XR0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trappc6aQ78XR0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trappc6aQ78XR0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trappc6aQ78XR0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trappc6aQ78XR0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trappc6aQ78XR0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trappc6aQ78XR0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trappc6aQ78XR0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.29■■□□□ 1.16
Trappc6aQ78XR0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trappc6aQ78XR0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trappc6aQ78XR0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trappc6aQ78XR0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.28■■□□□ 1.16
Trappc6aQ78XR0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trappc6aQ78XR0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trappc6aQ78XR0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trappc6aQ78XR0 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.27■■□□□ 1.16
Trappc6aQ78XR0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trappc6aQ78XR0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trappc6aQ78XR0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trappc6aQ78XR0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trappc6aQ78XR0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms