Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VcanQ62059 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.86■■□□□ 1.09
VcanQ62059 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VcanQ62059 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VcanQ62059 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
VcanQ62059 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.85■■□□□ 1.09
VcanQ62059 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
VcanQ62059 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VcanQ62059 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.84■■□□□ 1.09
VcanQ62059 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VcanQ62059 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
VcanQ62059 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.84■■□□□ 1.09
VcanQ62059 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VcanQ62059 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.83■■□□□ 1.09
VcanQ62059 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VcanQ62059 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
VcanQ62059 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
VcanQ62059 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.81■■□□□ 1.08
VcanQ62059 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
VcanQ62059 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VcanQ62059 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VcanQ62059 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.79■■□□□ 1.08
VcanQ62059 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VcanQ62059 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
VcanQ62059 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VcanQ62059 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VcanQ62059 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VcanQ62059 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VcanQ62059 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VcanQ62059 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VcanQ62059 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VcanQ62059 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.78■■□□□ 1.08
VcanQ62059 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VcanQ62059 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
VcanQ62059 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VcanQ62059 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VcanQ62059 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.77■■□□□ 1.08
VcanQ62059 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.77■■□□□ 1.08
VcanQ62059 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VcanQ62059 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VcanQ62059 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VcanQ62059 Gm29257-201ENSMUST00000186115 639 ntBASIC21.76■■□□□ 1.07
VcanQ62059 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VcanQ62059 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VcanQ62059 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
VcanQ62059 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
VcanQ62059 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VcanQ62059 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.74■■□□□ 1.07
VcanQ62059 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VcanQ62059 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
VcanQ62059 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VcanQ62059 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VcanQ62059 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
VcanQ62059 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
VcanQ62059 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VcanQ62059 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
VcanQ62059 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
VcanQ62059 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VcanQ62059 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.72■■□□□ 1.07
VcanQ62059 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VcanQ62059 Gm10232-201ENSMUST00000089221 720 ntBASIC21.71■■□□□ 1.07
VcanQ62059 Amer2-203ENSMUST00000225247 2662 ntBASIC21.71■■□□□ 1.07
VcanQ62059 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VcanQ62059 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.71■■□□□ 1.07
VcanQ62059 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VcanQ62059 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
VcanQ62059 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
VcanQ62059 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.7■■□□□ 1.06
VcanQ62059 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VcanQ62059 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VcanQ62059 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VcanQ62059 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.69■■□□□ 1.06
VcanQ62059 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VcanQ62059 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.69■■□□□ 1.06
VcanQ62059 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VcanQ62059 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VcanQ62059 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
VcanQ62059 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
VcanQ62059 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.68■■□□□ 1.06
VcanQ62059 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VcanQ62059 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.66■■□□□ 1.06
VcanQ62059 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VcanQ62059 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VcanQ62059 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
VcanQ62059 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VcanQ62059 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.66■■□□□ 1.06
VcanQ62059 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VcanQ62059 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
VcanQ62059 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.65■■□□□ 1.06
VcanQ62059 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.65■■□□□ 1.06
VcanQ62059 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VcanQ62059 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
VcanQ62059 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
VcanQ62059 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
VcanQ62059 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.64■■□□□ 1.06
VcanQ62059 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VcanQ62059 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
VcanQ62059 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
VcanQ62059 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
VcanQ62059 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms