Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Gm43566-201ENSMUST00000196851 808 ntBASIC30.3■■■□□ 2.44
Mdc1Q5PSV9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC30.3■■■□□ 2.44
Mdc1Q5PSV9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
Mdc1Q5PSV9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Mdc1Q5PSV9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Mdc1Q5PSV9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Mdc1Q5PSV9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Mdc1Q5PSV9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Mdc1Q5PSV9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC30.29■■■□□ 2.44
Mdc1Q5PSV9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
Mdc1Q5PSV9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Mdc1Q5PSV9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC30.28■■■□□ 2.44
Mdc1Q5PSV9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC30.28■■■□□ 2.44
Mdc1Q5PSV9 Gm43592-201ENSMUST00000196922 1165 ntBASIC30.27■■■□□ 2.44
Mdc1Q5PSV9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Mdc1Q5PSV9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Mdc1Q5PSV9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Mdc1Q5PSV9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Mdc1Q5PSV9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.44
Mdc1Q5PSV9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
Mdc1Q5PSV9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
Mdc1Q5PSV9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Mdc1Q5PSV9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC30.25■■■□□ 2.43
Mdc1Q5PSV9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Mdc1Q5PSV9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Mdc1Q5PSV9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC30.24■■■□□ 2.43
Mdc1Q5PSV9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Mdc1Q5PSV9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Mdc1Q5PSV9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
Mdc1Q5PSV9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC30.23■■■□□ 2.43
Mdc1Q5PSV9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
Mdc1Q5PSV9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC30.22■■■□□ 2.43
Mdc1Q5PSV9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
Mdc1Q5PSV9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Mdc1Q5PSV9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Mdc1Q5PSV9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Mdc1Q5PSV9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Mdc1Q5PSV9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC30.22■■■□□ 2.43
Mdc1Q5PSV9 Gm45444-201ENSMUST00000211394 898 ntBASIC30.21■■■□□ 2.43
Mdc1Q5PSV9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
Mdc1Q5PSV9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
Mdc1Q5PSV9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
Mdc1Q5PSV9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.42
Mdc1Q5PSV9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC30.19■■■□□ 2.42
Mdc1Q5PSV9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Mdc1Q5PSV9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC30.19■■■□□ 2.42
Mdc1Q5PSV9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Mdc1Q5PSV9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Mdc1Q5PSV9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Mdc1Q5PSV9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Mdc1Q5PSV9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC30.18■■■□□ 2.42
Mdc1Q5PSV9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC30.18■■■□□ 2.42
Mdc1Q5PSV9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC30.18■■■□□ 2.42
Mdc1Q5PSV9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC30.17■■■□□ 2.42
Mdc1Q5PSV9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Mdc1Q5PSV9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Mdc1Q5PSV9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Mdc1Q5PSV9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Mdc1Q5PSV9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Mdc1Q5PSV9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Mdc1Q5PSV9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Mdc1Q5PSV9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
Mdc1Q5PSV9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
Mdc1Q5PSV9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Mdc1Q5PSV9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Mdc1Q5PSV9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC30.13■■■□□ 2.41
Mdc1Q5PSV9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
Mdc1Q5PSV9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Mdc1Q5PSV9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Mdc1Q5PSV9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC30.11■■■□□ 2.41
Mdc1Q5PSV9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
Mdc1Q5PSV9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Mdc1Q5PSV9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Mdc1Q5PSV9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
Mdc1Q5PSV9 Gm13238-201ENSMUST00000117655 780 ntBASIC30.1■■■□□ 2.41
Mdc1Q5PSV9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Mdc1Q5PSV9 AC093043.1-201ENSMUST00000226700 898 ntBASIC30.1■■■□□ 2.41
Mdc1Q5PSV9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
Mdc1Q5PSV9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Mdc1Q5PSV9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Mdc1Q5PSV9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC30.09■■■□□ 2.41
Mdc1Q5PSV9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Mdc1Q5PSV9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Mdc1Q5PSV9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Mdc1Q5PSV9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Mdc1Q5PSV9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Mdc1Q5PSV9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC30.08■■■□□ 2.41
Mdc1Q5PSV9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Mdc1Q5PSV9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Mdc1Q5PSV9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC30.07■■■□□ 2.4
Mdc1Q5PSV9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC30.06■■■□□ 2.4
Mdc1Q5PSV9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Mdc1Q5PSV9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Mdc1Q5PSV9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC30.04■■■□□ 2.4
Mdc1Q5PSV9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Mdc1Q5PSV9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Mdc1Q5PSV9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Mdc1Q5PSV9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Mdc1Q5PSV9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Mdc1Q5PSV9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms