Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nkx3-2P97503 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nkx3-2P97503 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nkx3-2P97503 Gm7332-201ENSMUST00000118351 454 ntBASIC21.17■□□□□ 0.98
Nkx3-2P97503 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nkx3-2P97503 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nkx3-2P97503 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.17■□□□□ 0.98
Nkx3-2P97503 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nkx3-2P97503 Gm27502-201ENSMUST00000183495 199 ntBASIC21.16■□□□□ 0.98
Nkx3-2P97503 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nkx3-2P97503 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nkx3-2P97503 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nkx3-2P97503 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nkx3-2P97503 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.14■□□□□ 0.97
Nkx3-2P97503 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.13■□□□□ 0.97
Nkx3-2P97503 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nkx3-2P97503 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nkx3-2P97503 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nkx3-2P97503 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Nkx3-2P97503 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nkx3-2P97503 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.12■□□□□ 0.97
Nkx3-2P97503 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nkx3-2P97503 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Nkx3-2P97503 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nkx3-2P97503 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.11■□□□□ 0.97
Nkx3-2P97503 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nkx3-2P97503 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Nkx3-2P97503 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nkx3-2P97503 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nkx3-2P97503 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx3-2P97503 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.1■□□□□ 0.97
Nkx3-2P97503 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Nkx3-2P97503 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx3-2P97503 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.09■□□□□ 0.97
Nkx3-2P97503 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx3-2P97503 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx3-2P97503 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.08■□□□□ 0.97
Nkx3-2P97503 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx3-2P97503 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.08■□□□□ 0.97
Nkx3-2P97503 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx3-2P97503 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx3-2P97503 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Nkx3-2P97503 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Nkx3-2P97503 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.07■□□□□ 0.96
Nkx3-2P97503 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.07■□□□□ 0.96
Nkx3-2P97503 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx3-2P97503 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx3-2P97503 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.07■□□□□ 0.96
Nkx3-2P97503 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx3-2P97503 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx3-2P97503 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx3-2P97503 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx3-2P97503 Gm44428-201ENSMUST00000204474 874 ntBASIC21.06■□□□□ 0.96
Nkx3-2P97503 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx3-2P97503 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nkx3-2P97503 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nkx3-2P97503 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.05■□□□□ 0.96
Nkx3-2P97503 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nkx3-2P97503 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nkx3-2P97503 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.04■□□□□ 0.96
Nkx3-2P97503 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nkx3-2P97503 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nkx3-2P97503 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nkx3-2P97503 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Nkx3-2P97503 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Nkx3-2P97503 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.02■□□□□ 0.96
Nkx3-2P97503 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx3-2P97503 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Nkx3-2P97503 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.02■□□□□ 0.96
Nkx3-2P97503 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.02■□□□□ 0.96
Nkx3-2P97503 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx3-2P97503 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx3-2P97503 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx3-2P97503 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Nkx3-2P97503 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Nkx3-2P97503 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Nkx3-2P97503 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx3-2P97503 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Nkx3-2P97503 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Nkx3-2P97503 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21■□□□□ 0.95
Nkx3-2P97503 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nkx3-2P97503 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.99■□□□□ 0.95
Nkx3-2P97503 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx3-2P97503 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx3-2P97503 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx3-2P97503 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Nkx3-2P97503 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx3-2P97503 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx3-2P97503 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx3-2P97503 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx3-2P97503 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.98■□□□□ 0.95
Nkx3-2P97503 Gm10420-201ENSMUST00000121713 882 ntBASIC20.98■□□□□ 0.95
Nkx3-2P97503 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx3-2P97503 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx3-2P97503 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Nkx3-2P97503 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx3-2P97503 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx3-2P97503 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx3-2P97503 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Nkx3-2P97503 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms