Protein–RNA interactions for Protein: P70441

Slc9a3r1, Na(+)/H(+) exchange regulatory cofactor NHE-RF1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a3r1P70441 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Slc9a3r1P70441 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Slc9a3r1P70441 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Slc9a3r1P70441 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Slc9a3r1P70441 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.04
Slc9a3r1P70441 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Slc9a3r1P70441 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc9a3r1P70441 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc9a3r1P70441 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Slc9a3r1P70441 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Slc9a3r1P70441 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Slc9a3r1P70441 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc9a3r1P70441 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.55■■□□□ 1.04
Slc9a3r1P70441 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc9a3r1P70441 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc9a3r1P70441 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Slc9a3r1P70441 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc9a3r1P70441 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Slc9a3r1P70441 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc9a3r1P70441 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Slc9a3r1P70441 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc9a3r1P70441 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Slc9a3r1P70441 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Slc9a3r1P70441 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.54■■□□□ 1.04
Slc9a3r1P70441 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.54■■□□□ 1.04
Slc9a3r1P70441 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.53■■□□□ 1.04
Slc9a3r1P70441 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Slc9a3r1P70441 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc9a3r1P70441 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc9a3r1P70441 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc9a3r1P70441 Gm44428-201ENSMUST00000204474 874 ntBASIC21.52■■□□□ 1.04
Slc9a3r1P70441 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Slc9a3r1P70441 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc9a3r1P70441 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc9a3r1P70441 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc9a3r1P70441 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc9a3r1P70441 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc9a3r1P70441 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc9a3r1P70441 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc9a3r1P70441 Gm10420-201ENSMUST00000121713 882 ntBASIC21.5■■□□□ 1.03
Slc9a3r1P70441 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc9a3r1P70441 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.5■■□□□ 1.03
Slc9a3r1P70441 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc9a3r1P70441 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc9a3r1P70441 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.49■■□□□ 1.03
Slc9a3r1P70441 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc9a3r1P70441 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Slc9a3r1P70441 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.48■■□□□ 1.03
Slc9a3r1P70441 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc9a3r1P70441 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.48■■□□□ 1.03
Slc9a3r1P70441 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Slc9a3r1P70441 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Slc9a3r1P70441 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Slc9a3r1P70441 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.47■■□□□ 1.03
Slc9a3r1P70441 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.46■■□□□ 1.03
Slc9a3r1P70441 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.46■■□□□ 1.03
Slc9a3r1P70441 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Slc9a3r1P70441 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slc9a3r1P70441 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Slc9a3r1P70441 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Slc9a3r1P70441 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc9a3r1P70441 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc9a3r1P70441 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc9a3r1P70441 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc9a3r1P70441 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc9a3r1P70441 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc9a3r1P70441 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc9a3r1P70441 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Slc9a3r1P70441 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Slc9a3r1P70441 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc9a3r1P70441 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Slc9a3r1P70441 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slc9a3r1P70441 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slc9a3r1P70441 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc9a3r1P70441 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Slc9a3r1P70441 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Slc9a3r1P70441 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc9a3r1P70441 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Slc9a3r1P70441 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc9a3r1P70441 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
Slc9a3r1P70441 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Slc9a3r1P70441 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.38■■□□□ 1.01
Slc9a3r1P70441 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc9a3r1P70441 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Slc9a3r1P70441 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc9a3r1P70441 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc9a3r1P70441 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc9a3r1P70441 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc9a3r1P70441 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc9a3r1P70441 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.36■■□□□ 1.01
Slc9a3r1P70441 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.35■■□□□ 1.01
Slc9a3r1P70441 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc9a3r1P70441 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc9a3r1P70441 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc9a3r1P70441 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Slc9a3r1P70441 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Slc9a3r1P70441 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc9a3r1P70441 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc9a3r1P70441 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Slc9a3r1P70441 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms