Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hmx3P42581 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Hmx3P42581 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmx3P42581 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Hmx3P42581 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Hmx3P42581 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmx3P42581 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmx3P42581 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.56■□□□□ 0.56
Hmx3P42581 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.56■□□□□ 0.56
Hmx3P42581 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Hmx3P42581 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.56■□□□□ 0.56
Hmx3P42581 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmx3P42581 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hmx3P42581 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Hmx3P42581 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmx3P42581 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmx3P42581 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmx3P42581 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hmx3P42581 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmx3P42581 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmx3P42581 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hmx3P42581 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hmx3P42581 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hmx3P42581 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmx3P42581 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Hmx3P42581 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmx3P42581 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmx3P42581 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmx3P42581 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.53■□□□□ 0.56
Hmx3P42581 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Hmx3P42581 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmx3P42581 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Hmx3P42581 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Hmx3P42581 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmx3P42581 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.52■□□□□ 0.56
Hmx3P42581 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmx3P42581 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmx3P42581 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmx3P42581 Gm30023-201ENSMUST00000197970 889 ntBASIC18.52■□□□□ 0.56
Hmx3P42581 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Hmx3P42581 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.51■□□□□ 0.55
Hmx3P42581 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmx3P42581 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmx3P42581 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Hmx3P42581 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hmx3P42581 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmx3P42581 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Hmx3P42581 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Hmx3P42581 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hmx3P42581 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.49■□□□□ 0.55
Hmx3P42581 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hmx3P42581 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmx3P42581 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.49■□□□□ 0.55
Hmx3P42581 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Hmx3P42581 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmx3P42581 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmx3P42581 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmx3P42581 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Hmx3P42581 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmx3P42581 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmx3P42581 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmx3P42581 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hmx3P42581 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmx3P42581 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Hmx3P42581 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hmx3P42581 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmx3P42581 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmx3P42581 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hmx3P42581 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hmx3P42581 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmx3P42581 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmx3P42581 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmx3P42581 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Hmx3P42581 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmx3P42581 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Hmx3P42581 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.45■□□□□ 0.54
Hmx3P42581 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.45■□□□□ 0.54
Hmx3P42581 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.45■□□□□ 0.54
Hmx3P42581 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmx3P42581 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.45■□□□□ 0.54
Hmx3P42581 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmx3P42581 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hmx3P42581 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.44■□□□□ 0.54
Hmx3P42581 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.44■□□□□ 0.54
Hmx3P42581 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hmx3P42581 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmx3P42581 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmx3P42581 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmx3P42581 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmx3P42581 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmx3P42581 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmx3P42581 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmx3P42581 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.43■□□□□ 0.54
Hmx3P42581 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmx3P42581 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmx3P42581 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
Hmx3P42581 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.42■□□□□ 0.54
Hmx3P42581 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Hmx3P42581 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hmx3P42581 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms