Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Cdkn1aP39689 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cdkn1aP39689 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkn1aP39689 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkn1aP39689 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.62■□□□□ 0.57
Cdkn1aP39689 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdkn1aP39689 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdkn1aP39689 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdkn1aP39689 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdkn1aP39689 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdkn1aP39689 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdkn1aP39689 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cdkn1aP39689 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdkn1aP39689 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.6■□□□□ 0.57
Cdkn1aP39689 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cdkn1aP39689 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdkn1aP39689 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdkn1aP39689 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdkn1aP39689 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdkn1aP39689 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cdkn1aP39689 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdkn1aP39689 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdkn1aP39689 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdkn1aP39689 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cdkn1aP39689 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdkn1aP39689 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdkn1aP39689 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.58■□□□□ 0.56
Cdkn1aP39689 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.58■□□□□ 0.56
Cdkn1aP39689 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdkn1aP39689 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdkn1aP39689 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Cdkn1aP39689 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdkn1aP39689 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.57■□□□□ 0.56
Cdkn1aP39689 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Cdkn1aP39689 Gm10420-201ENSMUST00000121713 882 ntBASIC18.57■□□□□ 0.56
Cdkn1aP39689 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkn1aP39689 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cdkn1aP39689 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkn1aP39689 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkn1aP39689 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkn1aP39689 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkn1aP39689 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.57■□□□□ 0.56
Cdkn1aP39689 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.57■□□□□ 0.56
Cdkn1aP39689 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkn1aP39689 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkn1aP39689 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkn1aP39689 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cdkn1aP39689 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkn1aP39689 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkn1aP39689 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
Cdkn1aP39689 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkn1aP39689 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.55■□□□□ 0.56
Cdkn1aP39689 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkn1aP39689 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.55■□□□□ 0.56
Cdkn1aP39689 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkn1aP39689 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cdkn1aP39689 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn1aP39689 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn1aP39689 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn1aP39689 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.54■□□□□ 0.56
Cdkn1aP39689 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn1aP39689 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn1aP39689 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cdkn1aP39689 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn1aP39689 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn1aP39689 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn1aP39689 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn1aP39689 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn1aP39689 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkn1aP39689 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkn1aP39689 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.52■□□□□ 0.56
Cdkn1aP39689 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cdkn1aP39689 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkn1aP39689 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdkn1aP39689 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cdkn1aP39689 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn1aP39689 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Cdkn1aP39689 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn1aP39689 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn1aP39689 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn1aP39689 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn1aP39689 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkn1aP39689 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cdkn1aP39689 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cdkn1aP39689 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkn1aP39689 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cdkn1aP39689 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cdkn1aP39689 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdkn1aP39689 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdkn1aP39689 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdkn1aP39689 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdkn1aP39689 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdkn1aP39689 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.48■□□□□ 0.55
Cdkn1aP39689 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdkn1aP39689 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Cdkn1aP39689 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.48■□□□□ 0.55
Cdkn1aP39689 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Cdkn1aP39689 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cdkn1aP39689 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.47■□□□□ 0.55
Cdkn1aP39689 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms