Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sftpa1P35242 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Sftpa1P35242 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sftpa1P35242 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.1■□□□□ 0.97
Sftpa1P35242 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sftpa1P35242 Gm9959-201ENSMUST00000068277 390 ntBASIC21.1■□□□□ 0.97
Sftpa1P35242 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Sftpa1P35242 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.09■□□□□ 0.97
Sftpa1P35242 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.09■□□□□ 0.97
Sftpa1P35242 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.09■□□□□ 0.97
Sftpa1P35242 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sftpa1P35242 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Sftpa1P35242 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sftpa1P35242 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.07■□□□□ 0.96
Sftpa1P35242 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sftpa1P35242 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sftpa1P35242 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sftpa1P35242 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Sftpa1P35242 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sftpa1P35242 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.06■□□□□ 0.96
Sftpa1P35242 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.06■□□□□ 0.96
Sftpa1P35242 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sftpa1P35242 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Sftpa1P35242 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sftpa1P35242 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.05■□□□□ 0.96
Sftpa1P35242 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sftpa1P35242 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.04■□□□□ 0.96
Sftpa1P35242 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sftpa1P35242 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sftpa1P35242 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sftpa1P35242 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Sftpa1P35242 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Sftpa1P35242 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sftpa1P35242 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Sftpa1P35242 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sftpa1P35242 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sftpa1P35242 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.02■□□□□ 0.96
Sftpa1P35242 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Sftpa1P35242 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.02■□□□□ 0.96
Sftpa1P35242 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sftpa1P35242 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sftpa1P35242 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sftpa1P35242 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.01■□□□□ 0.95
Sftpa1P35242 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sftpa1P35242 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sftpa1P35242 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sftpa1P35242 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Sftpa1P35242 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sftpa1P35242 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sftpa1P35242 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sftpa1P35242 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.99■□□□□ 0.95
Sftpa1P35242 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.99■□□□□ 0.95
Sftpa1P35242 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.99■□□□□ 0.95
Sftpa1P35242 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.99■□□□□ 0.95
Sftpa1P35242 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sftpa1P35242 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.98■□□□□ 0.95
Sftpa1P35242 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sftpa1P35242 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sftpa1P35242 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.97■□□□□ 0.95
Sftpa1P35242 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sftpa1P35242 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.96■□□□□ 0.95
Sftpa1P35242 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sftpa1P35242 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sftpa1P35242 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Sftpa1P35242 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sftpa1P35242 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sftpa1P35242 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sftpa1P35242 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sftpa1P35242 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sftpa1P35242 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sftpa1P35242 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sftpa1P35242 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sftpa1P35242 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.94■□□□□ 0.94
Sftpa1P35242 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sftpa1P35242 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Sftpa1P35242 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.94■□□□□ 0.94
Sftpa1P35242 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sftpa1P35242 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sftpa1P35242 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Sftpa1P35242 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sftpa1P35242 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sftpa1P35242 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.93■□□□□ 0.94
Sftpa1P35242 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sftpa1P35242 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sftpa1P35242 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sftpa1P35242 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.92■□□□□ 0.94
Sftpa1P35242 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.92■□□□□ 0.94
Sftpa1P35242 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sftpa1P35242 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.92■□□□□ 0.94
Sftpa1P35242 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sftpa1P35242 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sftpa1P35242 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Sftpa1P35242 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sftpa1P35242 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.91■□□□□ 0.94
Sftpa1P35242 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sftpa1P35242 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.9■□□□□ 0.94
Sftpa1P35242 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.9■□□□□ 0.94
Sftpa1P35242 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Sftpa1P35242 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.89■□□□□ 0.93
Sftpa1P35242 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms