Protein–RNA interactions for Protein: P33609

Pola1, DNA polymerase alpha catalytic subunit, mousemouse

Predictions only

Length 1,465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pola1P33609 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC31.39■■■□□ 2.62
Pola1P33609 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Pola1P33609 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
Pola1P33609 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC31.38■■■□□ 2.61
Pola1P33609 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Pola1P33609 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
Pola1P33609 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC31.37■■■□□ 2.61
Pola1P33609 Gm5921-201ENSMUST00000075898 882 ntBASIC31.37■■■□□ 2.61
Pola1P33609 Gm5067-201ENSMUST00000170449 1009 ntBASIC31.36■■■□□ 2.61
Pola1P33609 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC31.36■■■□□ 2.61
Pola1P33609 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Pola1P33609 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Pola1P33609 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Pola1P33609 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC31.35■■■□□ 2.61
Pola1P33609 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Pola1P33609 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Pola1P33609 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
Pola1P33609 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Pola1P33609 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Pola1P33609 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Pola1P33609 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Pola1P33609 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC31.32■■■□□ 2.6
Pola1P33609 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Pola1P33609 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
Pola1P33609 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
Pola1P33609 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC31.31■■■□□ 2.6
Pola1P33609 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC31.31■■■□□ 2.6
Pola1P33609 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Pola1P33609 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Pola1P33609 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC31.3■■■□□ 2.6
Pola1P33609 Gm10420-201ENSMUST00000121713 882 ntBASIC31.3■■■□□ 2.6
Pola1P33609 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Pola1P33609 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Pola1P33609 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
Pola1P33609 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC31.29■■■□□ 2.6
Pola1P33609 Gm44428-201ENSMUST00000204474 874 ntBASIC31.29■■■□□ 2.6
Pola1P33609 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC31.29■■■□□ 2.6
Pola1P33609 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Pola1P33609 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Pola1P33609 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Pola1P33609 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Pola1P33609 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Pola1P33609 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Pola1P33609 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Pola1P33609 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Pola1P33609 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Pola1P33609 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC31.26■■■□□ 2.6
Pola1P33609 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Pola1P33609 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Pola1P33609 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC31.26■■■□□ 2.59
Pola1P33609 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
Pola1P33609 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Pola1P33609 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC31.25■■■□□ 2.59
Pola1P33609 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Pola1P33609 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pola1P33609 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pola1P33609 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pola1P33609 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pola1P33609 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
Pola1P33609 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
Pola1P33609 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Pola1P33609 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Pola1P33609 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Pola1P33609 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC31.22■■■□□ 2.59
Pola1P33609 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pola1P33609 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pola1P33609 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC31.21■■■□□ 2.59
Pola1P33609 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pola1P33609 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC31.2■■■□□ 2.59
Pola1P33609 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Pola1P33609 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC31.19■■■□□ 2.58
Pola1P33609 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC31.18■■■□□ 2.58
Pola1P33609 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
Pola1P33609 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Pola1P33609 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC31.17■■■□□ 2.58
Pola1P33609 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
Pola1P33609 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Pola1P33609 Gm15546-201ENSMUST00000122095 826 ntBASIC31.14■■■□□ 2.58
Pola1P33609 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
Pola1P33609 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
Pola1P33609 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.57
Pola1P33609 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
Pola1P33609 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
Pola1P33609 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC31.13■■■□□ 2.57
Pola1P33609 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Pola1P33609 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC31.13■■■□□ 2.57
Pola1P33609 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Pola1P33609 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
Pola1P33609 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
Pola1P33609 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Pola1P33609 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
Pola1P33609 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Pola1P33609 Gm5522-201ENSMUST00000189483 1242 ntBASIC31.08■■■□□ 2.57
Pola1P33609 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Pola1P33609 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Pola1P33609 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Pola1P33609 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
Pola1P33609 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Pola1P33609 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Pola1P33609 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms