Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Best1O88870 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Best1O88870 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Best1O88870 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Best1O88870 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Best1O88870 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Best1O88870 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Best1O88870 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Best1O88870 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Best1O88870 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Best1O88870 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Best1O88870 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.91■■□□□ 1.1
Best1O88870 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Best1O88870 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Best1O88870 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Best1O88870 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Best1O88870 Gm10420-201ENSMUST00000121713 882 ntBASIC21.9■■□□□ 1.1
Best1O88870 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Best1O88870 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Best1O88870 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Best1O88870 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
Best1O88870 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Best1O88870 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Best1O88870 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Best1O88870 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Best1O88870 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Best1O88870 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Best1O88870 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Best1O88870 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Best1O88870 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
Best1O88870 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Best1O88870 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Best1O88870 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Best1O88870 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.87■■□□□ 1.09
Best1O88870 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Best1O88870 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Best1O88870 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Best1O88870 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.86■■□□□ 1.09
Best1O88870 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Best1O88870 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.85■■□□□ 1.09
Best1O88870 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Best1O88870 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.85■■□□□ 1.09
Best1O88870 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Best1O88870 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Best1O88870 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Best1O88870 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Best1O88870 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Best1O88870 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.84■■□□□ 1.09
Best1O88870 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Best1O88870 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.83■■□□□ 1.09
Best1O88870 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
Best1O88870 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Best1O88870 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.83■■□□□ 1.09
Best1O88870 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.83■■□□□ 1.08
Best1O88870 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.82■■□□□ 1.08
Best1O88870 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Best1O88870 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.82■■□□□ 1.08
Best1O88870 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Best1O88870 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.81■■□□□ 1.08
Best1O88870 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Best1O88870 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Best1O88870 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Best1O88870 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Best1O88870 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Best1O88870 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Best1O88870 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Best1O88870 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Best1O88870 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Best1O88870 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Best1O88870 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Best1O88870 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Best1O88870 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Best1O88870 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.78■■□□□ 1.08
Best1O88870 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Best1O88870 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Best1O88870 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Best1O88870 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Best1O88870 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Best1O88870 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Best1O88870 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.77■■□□□ 1.08
Best1O88870 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Best1O88870 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Best1O88870 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Best1O88870 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Best1O88870 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Best1O88870 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Best1O88870 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Best1O88870 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Best1O88870 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.74■■□□□ 1.07
Best1O88870 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Best1O88870 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.74■■□□□ 1.07
Best1O88870 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Best1O88870 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.73■■□□□ 1.07
Best1O88870 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Best1O88870 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Best1O88870 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Best1O88870 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Best1O88870 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Best1O88870 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Best1O88870 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms