Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Shoc2O88520 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Shoc2O88520 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shoc2O88520 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.21■■□□□ 1.31
Shoc2O88520 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shoc2O88520 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Shoc2O88520 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Shoc2O88520 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Shoc2O88520 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Shoc2O88520 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.2■■□□□ 1.3
Shoc2O88520 Mir3960-201ENSMUST00000198213 73 ntBASIC23.2■■□□□ 1.3
Shoc2O88520 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.2■■□□□ 1.3
Shoc2O88520 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.2■■□□□ 1.3
Shoc2O88520 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Shoc2O88520 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
Shoc2O88520 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Shoc2O88520 Gm6311-201ENSMUST00000073790 878 ntBASIC23.19■■□□□ 1.3
Shoc2O88520 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Shoc2O88520 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.19■■□□□ 1.3
Shoc2O88520 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Shoc2O88520 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Shoc2O88520 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Shoc2O88520 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Shoc2O88520 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Shoc2O88520 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Shoc2O88520 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Shoc2O88520 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.17■■□□□ 1.3
Shoc2O88520 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Shoc2O88520 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Shoc2O88520 Gm45364-201ENSMUST00000210883 159 ntBASIC23.15■■□□□ 1.3
Shoc2O88520 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.15■■□□□ 1.3
Shoc2O88520 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
Shoc2O88520 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.15■■□□□ 1.3
Shoc2O88520 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.14■■□□□ 1.29
Shoc2O88520 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.13■■□□□ 1.29
Shoc2O88520 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.13■■□□□ 1.29
Shoc2O88520 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Shoc2O88520 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Shoc2O88520 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Shoc2O88520 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Shoc2O88520 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Shoc2O88520 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.12■■□□□ 1.29
Shoc2O88520 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Shoc2O88520 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Shoc2O88520 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.11■■□□□ 1.29
Shoc2O88520 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Shoc2O88520 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.11■■□□□ 1.29
Shoc2O88520 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Shoc2O88520 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Shoc2O88520 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Shoc2O88520 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Shoc2O88520 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Shoc2O88520 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Shoc2O88520 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.09■■□□□ 1.29
Shoc2O88520 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
Shoc2O88520 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.09■■□□□ 1.29
Shoc2O88520 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Shoc2O88520 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Shoc2O88520 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Shoc2O88520 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Shoc2O88520 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Shoc2O88520 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.08■■□□□ 1.29
Shoc2O88520 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.08■■□□□ 1.28
Shoc2O88520 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Shoc2O88520 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Shoc2O88520 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Shoc2O88520 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Shoc2O88520 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Shoc2O88520 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Shoc2O88520 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.06■■□□□ 1.28
Shoc2O88520 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Shoc2O88520 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Shoc2O88520 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Shoc2O88520 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Shoc2O88520 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Shoc2O88520 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Shoc2O88520 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Shoc2O88520 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Shoc2O88520 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Shoc2O88520 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.03■■□□□ 1.28
Shoc2O88520 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Shoc2O88520 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Shoc2O88520 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Shoc2O88520 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Shoc2O88520 Gm9812-201ENSMUST00000061934 968 ntBASIC23.03■■□□□ 1.28
Shoc2O88520 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Shoc2O88520 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Shoc2O88520 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.02■■□□□ 1.28
Shoc2O88520 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Shoc2O88520 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.02■■□□□ 1.28
Shoc2O88520 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Shoc2O88520 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23■■□□□ 1.27
Shoc2O88520 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Shoc2O88520 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23■■□□□ 1.27
Shoc2O88520 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23■■□□□ 1.27
Shoc2O88520 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23■■□□□ 1.27
Shoc2O88520 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Shoc2O88520 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Shoc2O88520 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Shoc2O88520 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms