Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pkd1O08852 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.85□□□□□ -0.03
Pkd1O08852 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC14.85□□□□□ -0.03
Pkd1O08852 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pkd1O08852 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pkd1O08852 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pkd1O08852 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pkd1O08852 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pkd1O08852 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pkd1O08852 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.84□□□□□ -0.03
Pkd1O08852 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.84□□□□□ -0.03
Pkd1O08852 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Pkd1O08852 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pkd1O08852 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pkd1O08852 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pkd1O08852 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Pkd1O08852 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pkd1O08852 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pkd1O08852 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pkd1O08852 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC14.83□□□□□ -0.04
Pkd1O08852 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pkd1O08852 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pkd1O08852 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pkd1O08852 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pkd1O08852 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pkd1O08852 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pkd1O08852 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.81□□□□□ -0.04
Pkd1O08852 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.8□□□□□ -0.04
Pkd1O08852 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pkd1O08852 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pkd1O08852 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pkd1O08852 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pkd1O08852 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pkd1O08852 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pkd1O08852 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pkd1O08852 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pkd1O08852 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pkd1O08852 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.8□□□□□ -0.04
Pkd1O08852 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pkd1O08852 Etf1-202ENSMUST00000180351 108 ntBASIC14.79□□□□□ -0.04
Pkd1O08852 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Pkd1O08852 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pkd1O08852 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pkd1O08852 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC14.78□□□□□ -0.04
Pkd1O08852 Gm4419-202ENSMUST00000226239 1431 ntBASIC14.78□□□□□ -0.04
Pkd1O08852 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pkd1O08852 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pkd1O08852 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pkd1O08852 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pkd1O08852 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC14.77□□□□□ -0.04
Pkd1O08852 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Pkd1O08852 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pkd1O08852 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pkd1O08852 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pkd1O08852 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pkd1O08852 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pkd1O08852 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pkd1O08852 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.76□□□□□ -0.05
Pkd1O08852 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pkd1O08852 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.76□□□□□ -0.05
Pkd1O08852 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.75□□□□□ -0.05
Pkd1O08852 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pkd1O08852 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.75□□□□□ -0.05
Pkd1O08852 Gm10232-201ENSMUST00000089221 720 ntBASIC14.75□□□□□ -0.05
Pkd1O08852 Gm43445-201ENSMUST00000198564 2091 ntBASIC14.75□□□□□ -0.05
Pkd1O08852 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pkd1O08852 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.75□□□□□ -0.05
Pkd1O08852 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pkd1O08852 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pkd1O08852 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC14.75□□□□□ -0.05
Pkd1O08852 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pkd1O08852 Gm21956-201ENSMUST00000179946 522 ntBASIC14.75□□□□□ -0.05
Pkd1O08852 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pkd1O08852 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pkd1O08852 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.74□□□□□ -0.05
Pkd1O08852 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.74□□□□□ -0.05
Pkd1O08852 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pkd1O08852 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pkd1O08852 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.74□□□□□ -0.05
Pkd1O08852 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pkd1O08852 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pkd1O08852 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pkd1O08852 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pkd1O08852 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pkd1O08852 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pkd1O08852 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.73□□□□□ -0.05
Pkd1O08852 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pkd1O08852 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC14.73□□□□□ -0.05
Pkd1O08852 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.73□□□□□ -0.05
Pkd1O08852 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pkd1O08852 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pkd1O08852 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.72□□□□□ -0.05
Pkd1O08852 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.72□□□□□ -0.05
Pkd1O08852 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pkd1O08852 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pkd1O08852 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pkd1O08852 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pkd1O08852 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pkd1O08852 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.72□□□□□ -0.05
Pkd1O08852 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms