Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
B020004C17RikJ3QP07 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
B020004C17RikJ3QP07 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
B020004C17RikJ3QP07 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
B020004C17RikJ3QP07 Rps24-207ENSMUST00000224568 714 ntBASIC25.88■■□□□ 1.73
B020004C17RikJ3QP07 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
B020004C17RikJ3QP07 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC25.87■■□□□ 1.73
B020004C17RikJ3QP07 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
B020004C17RikJ3QP07 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
B020004C17RikJ3QP07 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
B020004C17RikJ3QP07 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC25.86■■□□□ 1.73
B020004C17RikJ3QP07 Gm15820-201ENSMUST00000201566 728 ntBASIC25.86■■□□□ 1.73
B020004C17RikJ3QP07 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.85■■□□□ 1.73
B020004C17RikJ3QP07 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
B020004C17RikJ3QP07 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
B020004C17RikJ3QP07 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC25.85■■□□□ 1.73
B020004C17RikJ3QP07 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
B020004C17RikJ3QP07 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.84■■□□□ 1.73
B020004C17RikJ3QP07 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
B020004C17RikJ3QP07 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
B020004C17RikJ3QP07 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
B020004C17RikJ3QP07 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
B020004C17RikJ3QP07 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC25.82■■□□□ 1.72
B020004C17RikJ3QP07 Gm45102-201ENSMUST00000207427 857 ntBASIC25.82■■□□□ 1.72
B020004C17RikJ3QP07 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC25.81■■□□□ 1.72
B020004C17RikJ3QP07 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
B020004C17RikJ3QP07 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
B020004C17RikJ3QP07 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
B020004C17RikJ3QP07 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
B020004C17RikJ3QP07 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
B020004C17RikJ3QP07 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC25.8■■□□□ 1.72
B020004C17RikJ3QP07 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC25.79■■□□□ 1.72
B020004C17RikJ3QP07 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
B020004C17RikJ3QP07 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
B020004C17RikJ3QP07 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
B020004C17RikJ3QP07 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
B020004C17RikJ3QP07 Gm42501-201ENSMUST00000200220 1026 ntBASIC25.78■■□□□ 1.72
B020004C17RikJ3QP07 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
B020004C17RikJ3QP07 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.78■■□□□ 1.72
B020004C17RikJ3QP07 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
B020004C17RikJ3QP07 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
B020004C17RikJ3QP07 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
B020004C17RikJ3QP07 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
B020004C17RikJ3QP07 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
B020004C17RikJ3QP07 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC25.76■■□□□ 1.71
B020004C17RikJ3QP07 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
B020004C17RikJ3QP07 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
B020004C17RikJ3QP07 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
B020004C17RikJ3QP07 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
B020004C17RikJ3QP07 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
B020004C17RikJ3QP07 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
B020004C17RikJ3QP07 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
B020004C17RikJ3QP07 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
B020004C17RikJ3QP07 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
B020004C17RikJ3QP07 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
B020004C17RikJ3QP07 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC25.74■■□□□ 1.71
B020004C17RikJ3QP07 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
B020004C17RikJ3QP07 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
B020004C17RikJ3QP07 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
B020004C17RikJ3QP07 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC25.74■■□□□ 1.71
B020004C17RikJ3QP07 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
B020004C17RikJ3QP07 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC25.73■■□□□ 1.71
B020004C17RikJ3QP07 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.73■■□□□ 1.71
B020004C17RikJ3QP07 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
B020004C17RikJ3QP07 Amer2-203ENSMUST00000225247 2662 ntBASIC25.73■■□□□ 1.71
B020004C17RikJ3QP07 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
B020004C17RikJ3QP07 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC25.71■■□□□ 1.71
B020004C17RikJ3QP07 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
B020004C17RikJ3QP07 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
B020004C17RikJ3QP07 Gm18755-201ENSMUST00000218030 1099 ntBASIC25.71■■□□□ 1.71
B020004C17RikJ3QP07 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
B020004C17RikJ3QP07 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
B020004C17RikJ3QP07 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
B020004C17RikJ3QP07 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
B020004C17RikJ3QP07 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
B020004C17RikJ3QP07 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
B020004C17RikJ3QP07 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
B020004C17RikJ3QP07 Gm14117-201ENSMUST00000122417 843 ntBASIC25.68■■□□□ 1.7
B020004C17RikJ3QP07 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC25.68■■□□□ 1.7
B020004C17RikJ3QP07 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
B020004C17RikJ3QP07 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
B020004C17RikJ3QP07 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
B020004C17RikJ3QP07 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
B020004C17RikJ3QP07 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC25.67■■□□□ 1.7
B020004C17RikJ3QP07 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
B020004C17RikJ3QP07 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
B020004C17RikJ3QP07 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
B020004C17RikJ3QP07 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
B020004C17RikJ3QP07 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
B020004C17RikJ3QP07 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
B020004C17RikJ3QP07 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
B020004C17RikJ3QP07 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
B020004C17RikJ3QP07 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
B020004C17RikJ3QP07 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
B020004C17RikJ3QP07 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
B020004C17RikJ3QP07 Gm9959-201ENSMUST00000068277 390 ntBASIC25.63■■□□□ 1.69
B020004C17RikJ3QP07 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
B020004C17RikJ3QP07 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
B020004C17RikJ3QP07 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
B020004C17RikJ3QP07 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms