Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Gm11236J3QMS7 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Gm11236J3QMS7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Gm11236J3QMS7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Gm11236J3QMS7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.97■■□□□ 1.43
Gm11236J3QMS7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
Gm11236J3QMS7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Gm11236J3QMS7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.97■■□□□ 1.43
Gm11236J3QMS7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Gm11236J3QMS7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
Gm11236J3QMS7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Gm11236J3QMS7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Gm11236J3QMS7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Gm11236J3QMS7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.96■■□□□ 1.43
Gm11236J3QMS7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Gm11236J3QMS7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Gm11236J3QMS7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Gm11236J3QMS7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Gm11236J3QMS7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Gm11236J3QMS7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Gm11236J3QMS7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.94■■□□□ 1.42
Gm11236J3QMS7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Gm11236J3QMS7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Gm11236J3QMS7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Gm11236J3QMS7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Gm11236J3QMS7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Gm11236J3QMS7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Gm11236J3QMS7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Gm11236J3QMS7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
Gm11236J3QMS7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Gm11236J3QMS7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Gm11236J3QMS7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Gm11236J3QMS7 Gm15546-201ENSMUST00000122095 826 ntBASIC23.91■■□□□ 1.42
Gm11236J3QMS7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Gm11236J3QMS7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Gm11236J3QMS7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Gm11236J3QMS7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Gm11236J3QMS7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Gm11236J3QMS7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.9■■□□□ 1.42
Gm11236J3QMS7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Gm11236J3QMS7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Gm11236J3QMS7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
Gm11236J3QMS7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Gm11236J3QMS7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Gm11236J3QMS7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Gm11236J3QMS7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Gm11236J3QMS7 Gm43566-201ENSMUST00000196851 808 ntBASIC23.88■■□□□ 1.41
Gm11236J3QMS7 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.88■■□□□ 1.41
Gm11236J3QMS7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
Gm11236J3QMS7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Gm11236J3QMS7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.87■■□□□ 1.41
Gm11236J3QMS7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.87■■□□□ 1.41
Gm11236J3QMS7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Gm11236J3QMS7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Gm11236J3QMS7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Gm11236J3QMS7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.85■■□□□ 1.41
Gm11236J3QMS7 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.85■■□□□ 1.41
Gm11236J3QMS7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Gm11236J3QMS7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Gm11236J3QMS7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Gm11236J3QMS7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.85■■□□□ 1.41
Gm11236J3QMS7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.84■■□□□ 1.41
Gm11236J3QMS7 Gm45444-201ENSMUST00000211394 898 ntBASIC23.84■■□□□ 1.41
Gm11236J3QMS7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
Gm11236J3QMS7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Gm11236J3QMS7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Gm11236J3QMS7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Gm11236J3QMS7 Gm13238-201ENSMUST00000117655 780 ntBASIC23.83■■□□□ 1.41
Gm11236J3QMS7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Gm11236J3QMS7 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Gm11236J3QMS7 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.82■■□□□ 1.4
Gm11236J3QMS7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.82■■□□□ 1.4
Gm11236J3QMS7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.82■■□□□ 1.4
Gm11236J3QMS7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Gm11236J3QMS7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Gm11236J3QMS7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Gm11236J3QMS7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Gm11236J3QMS7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Gm11236J3QMS7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.81■■□□□ 1.4
Gm11236J3QMS7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Gm11236J3QMS7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
Gm11236J3QMS7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.81■■□□□ 1.4
Gm11236J3QMS7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Gm11236J3QMS7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Gm11236J3QMS7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Gm11236J3QMS7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Gm11236J3QMS7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Gm11236J3QMS7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Gm11236J3QMS7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Gm11236J3QMS7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Gm11236J3QMS7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.79■■□□□ 1.4
Gm11236J3QMS7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Gm11236J3QMS7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.79■■□□□ 1.4
Gm11236J3QMS7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Gm11236J3QMS7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Gm11236J3QMS7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Gm11236J3QMS7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Gm11236J3QMS7 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.78■■□□□ 1.4
Gm11236J3QMS7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Gm11236J3QMS7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.77■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms