Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Gm5131-201ENSMUST00000212776 1238 ntBASIC11.44□□□□□ -0.58
Rnf213E9Q555 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf213E9Q555 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf213E9Q555 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf213E9Q555 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC11.44□□□□□ -0.58
Rnf213E9Q555 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC11.44□□□□□ -0.58
Rnf213E9Q555 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC11.44□□□□□ -0.58
Rnf213E9Q555 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rnf213E9Q555 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC11.43□□□□□ -0.58
Rnf213E9Q555 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC11.43□□□□□ -0.58
Rnf213E9Q555 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC11.43□□□□□ -0.58
Rnf213E9Q555 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf213E9Q555 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf213E9Q555 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf213E9Q555 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf213E9Q555 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf213E9Q555 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf213E9Q555 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf213E9Q555 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC11.41□□□□□ -0.58
Rnf213E9Q555 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf213E9Q555 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC11.41□□□□□ -0.58
Rnf213E9Q555 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf213E9Q555 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf213E9Q555 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf213E9Q555 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC11.4□□□□□ -0.58
Rnf213E9Q555 Gm18755-201ENSMUST00000218030 1099 ntBASIC11.4□□□□□ -0.58
Rnf213E9Q555 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf213E9Q555 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf213E9Q555 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Rnf213E9Q555 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf213E9Q555 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf213E9Q555 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf213E9Q555 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf213E9Q555 Gm43034-201ENSMUST00000198678 1364 ntBASIC11.39□□□□□ -0.59
Rnf213E9Q555 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Rnf213E9Q555 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf213E9Q555 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf213E9Q555 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf213E9Q555 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf213E9Q555 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf213E9Q555 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf213E9Q555 Gm44428-201ENSMUST00000204474 874 ntBASIC11.38□□□□□ -0.59
Rnf213E9Q555 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Rnf213E9Q555 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC11.37□□□□□ -0.59
Rnf213E9Q555 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC11.37□□□□□ -0.59
Rnf213E9Q555 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf213E9Q555 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf213E9Q555 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Rnf213E9Q555 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf213E9Q555 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rnf213E9Q555 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC11.37□□□□□ -0.59
Rnf213E9Q555 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf213E9Q555 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rnf213E9Q555 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC11.36□□□□□ -0.59
Rnf213E9Q555 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf213E9Q555 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf213E9Q555 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf213E9Q555 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf213E9Q555 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf213E9Q555 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC11.36□□□□□ -0.59
Rnf213E9Q555 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC11.35□□□□□ -0.59
Rnf213E9Q555 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Rnf213E9Q555 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf213E9Q555 AC140930.3-201ENSMUST00000222935 274 ntBASIC11.34□□□□□ -0.59
Rnf213E9Q555 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC11.34□□□□□ -0.59
Rnf213E9Q555 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf213E9Q555 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf213E9Q555 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Rnf213E9Q555 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf213E9Q555 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf213E9Q555 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf213E9Q555 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf213E9Q555 Gm22238-201ENSMUST00000175222 88 ntBASIC11.33□□□□□ -0.6
Rnf213E9Q555 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf213E9Q555 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Rnf213E9Q555 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf213E9Q555 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf213E9Q555 Flvcr1-202ENSMUST00000191946 1216 ntBASIC11.33□□□□□ -0.6
Rnf213E9Q555 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC11.33□□□□□ -0.6
Rnf213E9Q555 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf213E9Q555 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf213E9Q555 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf213E9Q555 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf213E9Q555 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf213E9Q555 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC11.32□□□□□ -0.6
Rnf213E9Q555 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf213E9Q555 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf213E9Q555 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC11.32□□□□□ -0.6
Rnf213E9Q555 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf213E9Q555 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC11.32□□□□□ -0.6
Rnf213E9Q555 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf213E9Q555 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf213E9Q555 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rnf213E9Q555 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf213E9Q555 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf213E9Q555 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC11.31□□□□□ -0.6
Rnf213E9Q555 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf213E9Q555 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf213E9Q555 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf213E9Q555 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms