Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv3-4A0A140T8Q4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv3-4A0A140T8Q4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv3-4A0A140T8Q4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv3-4A0A140T8Q4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC14.06□□□□□ -0.16
Igkv3-4A0A140T8Q4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.06□□□□□ -0.16
Igkv3-4A0A140T8Q4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv3-4A0A140T8Q4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv3-4A0A140T8Q4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Igkv3-4A0A140T8Q4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv3-4A0A140T8Q4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv3-4A0A140T8Q4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv3-4A0A140T8Q4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv3-4A0A140T8Q4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Igkv3-4A0A140T8Q4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv3-4A0A140T8Q4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv3-4A0A140T8Q4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Igkv3-4A0A140T8Q4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv3-4A0A140T8Q4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv3-4A0A140T8Q4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Igkv3-4A0A140T8Q4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC14.04□□□□□ -0.16
Igkv3-4A0A140T8Q4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Igkv3-4A0A140T8Q4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Igkv3-4A0A140T8Q4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Igkv3-4A0A140T8Q4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Igkv3-4A0A140T8Q4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Igkv3-4A0A140T8Q4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Igkv3-4A0A140T8Q4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Igkv3-4A0A140T8Q4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Igkv3-4A0A140T8Q4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC14.04□□□□□ -0.16
Igkv3-4A0A140T8Q4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Igkv3-4A0A140T8Q4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igkv3-4A0A140T8Q4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC14.03□□□□□ -0.16
Igkv3-4A0A140T8Q4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Igkv3-4A0A140T8Q4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igkv3-4A0A140T8Q4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igkv3-4A0A140T8Q4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igkv3-4A0A140T8Q4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igkv3-4A0A140T8Q4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Igkv3-4A0A140T8Q4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Igkv3-4A0A140T8Q4 Gm43863-201ENSMUST00000203822 1192 ntBASIC14.02□□□□□ -0.17
Igkv3-4A0A140T8Q4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC14.02□□□□□ -0.17
Igkv3-4A0A140T8Q4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Igkv3-4A0A140T8Q4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Igkv3-4A0A140T8Q4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Igkv3-4A0A140T8Q4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igkv3-4A0A140T8Q4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igkv3-4A0A140T8Q4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igkv3-4A0A140T8Q4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Igkv3-4A0A140T8Q4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igkv3-4A0A140T8Q4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igkv3-4A0A140T8Q4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC14□□□□□ -0.17
Igkv3-4A0A140T8Q4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Igkv3-4A0A140T8Q4 AC157572.2-201ENSMUST00000226970 908 ntBASIC14□□□□□ -0.17
Igkv3-4A0A140T8Q4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Igkv3-4A0A140T8Q4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Igkv3-4A0A140T8Q4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Igkv3-4A0A140T8Q4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Igkv3-4A0A140T8Q4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Igkv3-4A0A140T8Q4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC13.99□□□□□ -0.17
Igkv3-4A0A140T8Q4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC13.99□□□□□ -0.17
Igkv3-4A0A140T8Q4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Igkv3-4A0A140T8Q4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Igkv3-4A0A140T8Q4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Igkv3-4A0A140T8Q4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Igkv3-4A0A140T8Q4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Igkv3-4A0A140T8Q4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Igkv3-4A0A140T8Q4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Igkv3-4A0A140T8Q4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Igkv3-4A0A140T8Q4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Igkv3-4A0A140T8Q4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Igkv3-4A0A140T8Q4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Igkv3-4A0A140T8Q4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC13.98□□□□□ -0.17
Igkv3-4A0A140T8Q4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Igkv3-4A0A140T8Q4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Igkv3-4A0A140T8Q4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC13.98□□□□□ -0.17
Igkv3-4A0A140T8Q4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Igkv3-4A0A140T8Q4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Igkv3-4A0A140T8Q4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Igkv3-4A0A140T8Q4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Igkv3-4A0A140T8Q4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Igkv3-4A0A140T8Q4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Igkv3-4A0A140T8Q4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Igkv3-4A0A140T8Q4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Igkv3-4A0A140T8Q4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Igkv3-4A0A140T8Q4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Igkv3-4A0A140T8Q4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Igkv3-4A0A140T8Q4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Igkv3-4A0A140T8Q4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Igkv3-4A0A140T8Q4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Igkv3-4A0A140T8Q4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Igkv3-4A0A140T8Q4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Igkv3-4A0A140T8Q4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Igkv3-4A0A140T8Q4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Igkv3-4A0A140T8Q4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Igkv3-4A0A140T8Q4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Igkv3-4A0A140T8Q4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Igkv3-4A0A140T8Q4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Igkv3-4A0A140T8Q4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Igkv3-4A0A140T8Q4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms