Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv13-2A0A140T8N6 Gm42699-201ENSMUST00000198104 1657 ntBASIC15.6■□□□□ 0.09
Trbv13-2A0A140T8N6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv13-2A0A140T8N6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv13-2A0A140T8N6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv13-2A0A140T8N6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trbv13-2A0A140T8N6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.59■□□□□ 0.09
Trbv13-2A0A140T8N6 AC153911.1-201ENSMUST00000220378 758 ntBASIC15.59■□□□□ 0.09
Trbv13-2A0A140T8N6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv13-2A0A140T8N6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trbv13-2A0A140T8N6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv13-2A0A140T8N6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.58■□□□□ 0.08
Trbv13-2A0A140T8N6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv13-2A0A140T8N6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv13-2A0A140T8N6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv13-2A0A140T8N6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv13-2A0A140T8N6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv13-2A0A140T8N6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv13-2A0A140T8N6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv13-2A0A140T8N6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv13-2A0A140T8N6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv13-2A0A140T8N6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.57■□□□□ 0.08
Trbv13-2A0A140T8N6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.57■□□□□ 0.08
Trbv13-2A0A140T8N6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC15.57■□□□□ 0.08
Trbv13-2A0A140T8N6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv13-2A0A140T8N6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
Trbv13-2A0A140T8N6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv13-2A0A140T8N6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trbv13-2A0A140T8N6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv13-2A0A140T8N6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Trbv13-2A0A140T8N6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv13-2A0A140T8N6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv13-2A0A140T8N6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-2A0A140T8N6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-2A0A140T8N6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-2A0A140T8N6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-2A0A140T8N6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-2A0A140T8N6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-2A0A140T8N6 Terc-201ENSMUST00000082862 423 ntBASIC15.55■□□□□ 0.08
Trbv13-2A0A140T8N6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-2A0A140T8N6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trbv13-2A0A140T8N6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-2A0A140T8N6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv13-2A0A140T8N6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv13-2A0A140T8N6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.54■□□□□ 0.08
Trbv13-2A0A140T8N6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trbv13-2A0A140T8N6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv13-2A0A140T8N6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv13-2A0A140T8N6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv13-2A0A140T8N6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv13-2A0A140T8N6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv13-2A0A140T8N6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv13-2A0A140T8N6 Gm5987-201ENSMUST00000196433 1151 ntBASIC15.53■□□□□ 0.08
Trbv13-2A0A140T8N6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv13-2A0A140T8N6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv13-2A0A140T8N6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv13-2A0A140T8N6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv13-2A0A140T8N6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv13-2A0A140T8N6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv13-2A0A140T8N6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv13-2A0A140T8N6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv13-2A0A140T8N6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC15.51■□□□□ 0.07
Trbv13-2A0A140T8N6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv13-2A0A140T8N6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv13-2A0A140T8N6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv13-2A0A140T8N6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv13-2A0A140T8N6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.51■□□□□ 0.07
Trbv13-2A0A140T8N6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv13-2A0A140T8N6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv13-2A0A140T8N6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv13-2A0A140T8N6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv13-2A0A140T8N6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trbv13-2A0A140T8N6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv13-2A0A140T8N6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv13-2A0A140T8N6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv13-2A0A140T8N6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv13-2A0A140T8N6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv13-2A0A140T8N6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trbv13-2A0A140T8N6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trbv13-2A0A140T8N6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC15.5■□□□□ 0.07
Trbv13-2A0A140T8N6 Il17rd-202ENSMUST00000223942 2186 ntBASIC15.49■□□□□ 0.07
Trbv13-2A0A140T8N6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC15.49■□□□□ 0.07
Trbv13-2A0A140T8N6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv13-2A0A140T8N6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.49■□□□□ 0.07
Trbv13-2A0A140T8N6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trbv13-2A0A140T8N6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv13-2A0A140T8N6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv13-2A0A140T8N6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv13-2A0A140T8N6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv13-2A0A140T8N6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv13-2A0A140T8N6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv13-2A0A140T8N6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv13-2A0A140T8N6 Gm9910-201ENSMUST00000195385 1550 ntBASIC15.48■□□□□ 0.07
Trbv13-2A0A140T8N6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv13-2A0A140T8N6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC15.48■□□□□ 0.07
Trbv13-2A0A140T8N6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Trbv13-2A0A140T8N6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.47■□□□□ 0.07
Trbv13-2A0A140T8N6 Scarna2-201ENSMUST00000157560 414 ntBASIC15.47■□□□□ 0.07
Trbv13-2A0A140T8N6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv13-2A0A140T8N6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms