Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6d-7A0A075B6B0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6d-7A0A075B6B0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6d-7A0A075B6B0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6d-7A0A075B6B0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Trav6d-7A0A075B6B0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trav6d-7A0A075B6B0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.24■□□□□ 0.35
Trav6d-7A0A075B6B0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6d-7A0A075B6B0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Trav6d-7A0A075B6B0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6d-7A0A075B6B0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.23■□□□□ 0.35
Trav6d-7A0A075B6B0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.23■□□□□ 0.35
Trav6d-7A0A075B6B0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6d-7A0A075B6B0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6d-7A0A075B6B0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6d-7A0A075B6B0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6d-7A0A075B6B0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6d-7A0A075B6B0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trav6d-7A0A075B6B0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6d-7A0A075B6B0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6d-7A0A075B6B0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6d-7A0A075B6B0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav6d-7A0A075B6B0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6d-7A0A075B6B0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.22■□□□□ 0.35
Trav6d-7A0A075B6B0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6d-7A0A075B6B0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6d-7A0A075B6B0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-7A0A075B6B0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-7A0A075B6B0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-7A0A075B6B0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6d-7A0A075B6B0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Trav6d-7A0A075B6B0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trav6d-7A0A075B6B0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6d-7A0A075B6B0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6d-7A0A075B6B0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6d-7A0A075B6B0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav6d-7A0A075B6B0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6d-7A0A075B6B0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6d-7A0A075B6B0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6d-7A0A075B6B0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6d-7A0A075B6B0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trav6d-7A0A075B6B0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6d-7A0A075B6B0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6d-7A0A075B6B0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.18■□□□□ 0.34
Trav6d-7A0A075B6B0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6d-7A0A075B6B0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6d-7A0A075B6B0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6d-7A0A075B6B0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6d-7A0A075B6B0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6d-7A0A075B6B0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
Trav6d-7A0A075B6B0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6d-7A0A075B6B0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6d-7A0A075B6B0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6d-7A0A075B6B0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav6d-7A0A075B6B0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6d-7A0A075B6B0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Trav6d-7A0A075B6B0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6d-7A0A075B6B0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6d-7A0A075B6B0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.17■□□□□ 0.34
Trav6d-7A0A075B6B0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6d-7A0A075B6B0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trav6d-7A0A075B6B0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6d-7A0A075B6B0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6d-7A0A075B6B0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6d-7A0A075B6B0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6d-7A0A075B6B0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6d-7A0A075B6B0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6d-7A0A075B6B0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Trav6d-7A0A075B6B0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav6d-7A0A075B6B0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav6d-7A0A075B6B0 Gm6311-201ENSMUST00000073790 878 ntBASIC17.16■□□□□ 0.34
Trav6d-7A0A075B6B0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6d-7A0A075B6B0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6d-7A0A075B6B0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6d-7A0A075B6B0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6d-7A0A075B6B0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trav6d-7A0A075B6B0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6d-7A0A075B6B0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6d-7A0A075B6B0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6d-7A0A075B6B0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Trav6d-7A0A075B6B0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.14■□□□□ 0.33
Trav6d-7A0A075B6B0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.14■□□□□ 0.33
Trav6d-7A0A075B6B0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6d-7A0A075B6B0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6d-7A0A075B6B0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6d-7A0A075B6B0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6d-7A0A075B6B0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6d-7A0A075B6B0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trav6d-7A0A075B6B0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav6d-7A0A075B6B0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Trav6d-7A0A075B6B0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6d-7A0A075B6B0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav6d-7A0A075B6B0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6d-7A0A075B6B0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trav6d-7A0A075B6B0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Trav6d-7A0A075B6B0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trav6d-7A0A075B6B0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6d-7A0A075B6B0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav6d-7A0A075B6B0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6d-7A0A075B6B0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms