Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav3-4A0A075B654 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav3-4A0A075B654 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav3-4A0A075B654 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Trav3-4A0A075B654 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav3-4A0A075B654 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav3-4A0A075B654 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav3-4A0A075B654 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav3-4A0A075B654 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav3-4A0A075B654 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav3-4A0A075B654 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav3-4A0A075B654 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav3-4A0A075B654 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav3-4A0A075B654 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav3-4A0A075B654 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav3-4A0A075B654 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav3-4A0A075B654 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav3-4A0A075B654 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav3-4A0A075B654 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC15.11■□□□□ 0.01
Trav3-4A0A075B654 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3-4A0A075B654 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav3-4A0A075B654 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Trav3-4A0A075B654 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3-4A0A075B654 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3-4A0A075B654 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trav3-4A0A075B654 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav3-4A0A075B654 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav3-4A0A075B654 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav3-4A0A075B654 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav3-4A0A075B654 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav3-4A0A075B654 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav3-4A0A075B654 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav3-4A0A075B654 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav3-4A0A075B654 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav3-4A0A075B654 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav3-4A0A075B654 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav3-4A0A075B654 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav3-4A0A075B654 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav3-4A0A075B654 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav3-4A0A075B654 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav3-4A0A075B654 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Trav3-4A0A075B654 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav3-4A0A075B654 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav3-4A0A075B654 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trav3-4A0A075B654 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav3-4A0A075B654 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav3-4A0A075B654 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav3-4A0A075B654 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav3-4A0A075B654 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC15.07■□□□□ 0
Trav3-4A0A075B654 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3-4A0A075B654 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3-4A0A075B654 Gm25262-201ENSMUST00000174934 133 ntBASIC15.07■□□□□ 0
Trav3-4A0A075B654 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3-4A0A075B654 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav3-4A0A075B654 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3-4A0A075B654 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3-4A0A075B654 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3-4A0A075B654 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav3-4A0A075B654 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav3-4A0A075B654 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav3-4A0A075B654 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3-4A0A075B654 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3-4A0A075B654 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav3-4A0A075B654 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3-4A0A075B654 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav3-4A0A075B654 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
Trav3-4A0A075B654 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav3-4A0A075B654 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav3-4A0A075B654 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav3-4A0A075B654 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trav3-4A0A075B654 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav3-4A0A075B654 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav3-4A0A075B654 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav3-4A0A075B654 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav3-4A0A075B654 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trav3-4A0A075B654 Gm13042-201ENSMUST00000119244 1955 ntBASIC15.04■□□□□ -0
Trav3-4A0A075B654 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav3-4A0A075B654 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav3-4A0A075B654 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav3-4A0A075B654 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.04■□□□□ -0
Trav3-4A0A075B654 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3-4A0A075B654 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav3-4A0A075B654 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav3-4A0A075B654 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav3-4A0A075B654 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav3-4A0A075B654 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav3-4A0A075B654 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav3-4A0A075B654 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav3-4A0A075B654 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav3-4A0A075B654 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav3-4A0A075B654 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC15.02■□□□□ -0
Trav3-4A0A075B654 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav3-4A0A075B654 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav3-4A0A075B654 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav3-4A0A075B654 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trav3-4A0A075B654 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav3-4A0A075B654 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav3-4A0A075B654 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav3-4A0A075B654 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trav3-4A0A075B654 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms