Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.46■□□□□ 0.87
H2afb1S4R1E0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
H2afb1S4R1E0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
H2afb1S4R1E0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
H2afb1S4R1E0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
H2afb1S4R1E0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.45■□□□□ 0.86
H2afb1S4R1E0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
H2afb1S4R1E0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
H2afb1S4R1E0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H2afb1S4R1E0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H2afb1S4R1E0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
H2afb1S4R1E0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
H2afb1S4R1E0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H2afb1S4R1E0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H2afb1S4R1E0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb1S4R1E0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb1S4R1E0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.43■□□□□ 0.86
H2afb1S4R1E0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.42■□□□□ 0.86
H2afb1S4R1E0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2afb1S4R1E0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2afb1S4R1E0 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.42■□□□□ 0.86
H2afb1S4R1E0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
H2afb1S4R1E0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
H2afb1S4R1E0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
H2afb1S4R1E0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.41■□□□□ 0.86
H2afb1S4R1E0 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.41■□□□□ 0.86
H2afb1S4R1E0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
H2afb1S4R1E0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
H2afb1S4R1E0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
H2afb1S4R1E0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
H2afb1S4R1E0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
H2afb1S4R1E0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.4■□□□□ 0.86
H2afb1S4R1E0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
H2afb1S4R1E0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
H2afb1S4R1E0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
H2afb1S4R1E0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
H2afb1S4R1E0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
H2afb1S4R1E0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
H2afb1S4R1E0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H2afb1S4R1E0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H2afb1S4R1E0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
H2afb1S4R1E0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.36■□□□□ 0.85
H2afb1S4R1E0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.36■□□□□ 0.85
H2afb1S4R1E0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
H2afb1S4R1E0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
H2afb1S4R1E0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
H2afb1S4R1E0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
H2afb1S4R1E0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2afb1S4R1E0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2afb1S4R1E0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2afb1S4R1E0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2afb1S4R1E0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H2afb1S4R1E0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H2afb1S4R1E0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
H2afb1S4R1E0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
H2afb1S4R1E0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
H2afb1S4R1E0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
H2afb1S4R1E0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
H2afb1S4R1E0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
H2afb1S4R1E0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
H2afb1S4R1E0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
H2afb1S4R1E0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
H2afb1S4R1E0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
H2afb1S4R1E0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
H2afb1S4R1E0 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.32■□□□□ 0.84
H2afb1S4R1E0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.32■□□□□ 0.84
H2afb1S4R1E0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2afb1S4R1E0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2afb1S4R1E0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.31■□□□□ 0.84
H2afb1S4R1E0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.31■□□□□ 0.84
H2afb1S4R1E0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.31■□□□□ 0.84
H2afb1S4R1E0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
H2afb1S4R1E0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
H2afb1S4R1E0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2afb1S4R1E0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2afb1S4R1E0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2afb1S4R1E0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2afb1S4R1E0 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.3■□□□□ 0.84
H2afb1S4R1E0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2afb1S4R1E0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2afb1S4R1E0 Gm37136-201ENSMUST00000194368 194 ntBASIC20.29■□□□□ 0.84
H2afb1S4R1E0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
H2afb1S4R1E0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2afb1S4R1E0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2afb1S4R1E0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
H2afb1S4R1E0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.28■□□□□ 0.84
H2afb1S4R1E0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2afb1S4R1E0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2afb1S4R1E0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2afb1S4R1E0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
H2afb1S4R1E0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
H2afb1S4R1E0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2afb1S4R1E0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb1S4R1E0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.27■□□□□ 0.84
H2afb1S4R1E0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb1S4R1E0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb1S4R1E0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb1S4R1E0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb1S4R1E0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
H2afb1S4R1E0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms