Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smarcb1Q9Z0H3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Smarcb1Q9Z0H3 Gm44428-201ENSMUST00000204474 874 ntBASIC23.85■■□□□ 1.41
Smarcb1Q9Z0H3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smarcb1Q9Z0H3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smarcb1Q9Z0H3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.84■■□□□ 1.41
Smarcb1Q9Z0H3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.84■■□□□ 1.41
Smarcb1Q9Z0H3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Smarcb1Q9Z0H3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.83■■□□□ 1.41
Smarcb1Q9Z0H3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Smarcb1Q9Z0H3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smarcb1Q9Z0H3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smarcb1Q9Z0H3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smarcb1Q9Z0H3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Smarcb1Q9Z0H3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Smarcb1Q9Z0H3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smarcb1Q9Z0H3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.8■■□□□ 1.4
Smarcb1Q9Z0H3 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.8■■□□□ 1.4
Smarcb1Q9Z0H3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Smarcb1Q9Z0H3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Smarcb1Q9Z0H3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Smarcb1Q9Z0H3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Smarcb1Q9Z0H3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.78■■□□□ 1.4
Smarcb1Q9Z0H3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smarcb1Q9Z0H3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Smarcb1Q9Z0H3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.77■■□□□ 1.4
Smarcb1Q9Z0H3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Smarcb1Q9Z0H3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Smarcb1Q9Z0H3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Smarcb1Q9Z0H3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.75■■□□□ 1.39
Smarcb1Q9Z0H3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.75■■□□□ 1.39
Smarcb1Q9Z0H3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.74■■□□□ 1.39
Smarcb1Q9Z0H3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Smarcb1Q9Z0H3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
Smarcb1Q9Z0H3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smarcb1Q9Z0H3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Smarcb1Q9Z0H3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Smarcb1Q9Z0H3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smarcb1Q9Z0H3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smarcb1Q9Z0H3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smarcb1Q9Z0H3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.72■■□□□ 1.39
Smarcb1Q9Z0H3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.72■■□□□ 1.39
Smarcb1Q9Z0H3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.72■■□□□ 1.39
Smarcb1Q9Z0H3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Smarcb1Q9Z0H3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Smarcb1Q9Z0H3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.71■■□□□ 1.39
Smarcb1Q9Z0H3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
Smarcb1Q9Z0H3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.7■■□□□ 1.39
Smarcb1Q9Z0H3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Smarcb1Q9Z0H3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Smarcb1Q9Z0H3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smarcb1Q9Z0H3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smarcb1Q9Z0H3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smarcb1Q9Z0H3 Gm10420-201ENSMUST00000121713 882 ntBASIC23.69■■□□□ 1.38
Smarcb1Q9Z0H3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Smarcb1Q9Z0H3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smarcb1Q9Z0H3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.68■■□□□ 1.38
Smarcb1Q9Z0H3 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.68■■□□□ 1.38
Smarcb1Q9Z0H3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smarcb1Q9Z0H3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smarcb1Q9Z0H3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Smarcb1Q9Z0H3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smarcb1Q9Z0H3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Smarcb1Q9Z0H3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.67■■□□□ 1.38
Smarcb1Q9Z0H3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smarcb1Q9Z0H3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smarcb1Q9Z0H3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smarcb1Q9Z0H3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Smarcb1Q9Z0H3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smarcb1Q9Z0H3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Smarcb1Q9Z0H3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
Smarcb1Q9Z0H3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Smarcb1Q9Z0H3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smarcb1Q9Z0H3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Smarcb1Q9Z0H3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Smarcb1Q9Z0H3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Smarcb1Q9Z0H3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Smarcb1Q9Z0H3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Smarcb1Q9Z0H3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Smarcb1Q9Z0H3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Smarcb1Q9Z0H3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Smarcb1Q9Z0H3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Smarcb1Q9Z0H3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.63■■□□□ 1.37
Smarcb1Q9Z0H3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Smarcb1Q9Z0H3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Smarcb1Q9Z0H3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Smarcb1Q9Z0H3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Smarcb1Q9Z0H3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Smarcb1Q9Z0H3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.62■■□□□ 1.37
Smarcb1Q9Z0H3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Smarcb1Q9Z0H3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Smarcb1Q9Z0H3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Smarcb1Q9Z0H3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Smarcb1Q9Z0H3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Smarcb1Q9Z0H3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.61■■□□□ 1.37
Smarcb1Q9Z0H3 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.61■■□□□ 1.37
Smarcb1Q9Z0H3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Smarcb1Q9Z0H3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Smarcb1Q9Z0H3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Smarcb1Q9Z0H3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 112.6 ms